Query= MSMg01no134_d18.b1 MSMg01no134_d18.b1 CHROMAT_FILE:
MSMg01no134_d18.b1 PHD_FILE: MSMg01no134_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:26 2005
(365 letters)
>mm_chr15_91037954_91038713
Length = 760
Score = 636 bits (329), Expect = 0.0
Identities = 354/365 (96%), Gaps = 5/365 (1%)
Strand = Plus / Minus
Query: 1 acttcatcagtatcatagggataaaggacatgttggtccggacggctcctcatcttccct 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 acttcatcagtatcatagggataaaggtcatgttggtccggacggctcctcatcttccct 501
Query: 61 cctgttcacaatgaggggagacaatgcagattgcagggtcaggtcagtgagtacagttac 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctgttcacaatgaggggcgacaatgcagattgcagggtcaggtcagtgagtacagttac 441
Query: 121 tctggttgacctctcttaatgctcactaatgagggaggataaatatcagggaaaacgaga 180
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 tctggctgacctctcttaatgctcactagtgagggaggataaatatcagggaaaacgaga 381
Query: 181 aaccagaagacactgtaacatcaccttttgatcttatggatggataaccatccatcattt 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 gaccagaagacactgtaacatcaccttttgatcttatgg-----taaccatccatcattt 326
Query: 241 atttgatccatggaccatgaaataaaatactttatatttttctgcactcttgacttttgc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttgatccacggaccatgaaataaaatactttatatttttctgcactcttgacttttgc 266
Query: 301 ataaatttatactgggggagtataaaaaagtggcctctagaggaaaatgtcattaatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaatttatactgggggagtataaaaaagtggcctctagaggaaaatgtcattaatagt 206
Query: 361 attgt 365
|||||
Sbjct: 205 attgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 760
Length adjustment: 9
Effective length of query: 356
Effective length of database: 751
Effective search space: 267356
Effective search space used: 267356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_d18.g1 MSMg01no134_d18.g1 CHROMAT_FILE:
MSMg01no134_d18.g1 PHD_FILE: MSMg01no134_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:26 2005
(738 letters)
>mm_chr15_90875393_90876530
Length = 1138
Score = 1305 bits (675), Expect = 0.0
Identities = 730/765 (95%), Gaps = 28/765 (3%)
Strand = Plus / Plus
Query: 1 tattgcatttataagactgttgtgaaagcatcaatatatgtaaatactacccataacttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 175 tattgcatttataagactgttgtgaaagcatcaatatatgtaaatactacaaataacttg 234
Query: 61 tataactcgggtgaggcagcgcacgcctttaatcccaacactcagccagatctctgtgag 120
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 235 tataactcgggtgtggcagcgcacgcctttaatcccaacactcaggcagatctctgtgag 294
Query: 121 ttcaaggccagcctggtctacaaagtccacgaaagcccgggttctgttaccaagagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttcaaggccagcctggtctacaaagtccacgaaagcccgggttctgttaccaagagaaac 354
Query: 181 cccatccttaaataaatcaaaaacaacaaaacaaaaacaaatcaatacaaaagttggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cccatccttaaataaatcaaaaacaacaaaacaaaaacaaatcaatacaaaagttggtat 414
Query: 241 gatttttt---gttttacaacacagttctgatattcttcatattttaatattgccggaat 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gatttttttttgttttacaacacagttctgatattcttcatattttaatattgccggaat 474
Query: 298 ctcaaaaccttagagctggatttctgccacaagggtccttccttaccttcgcagggcttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctcaaaaccttagagctggatttctgccacaagggtccttccttaccttcgcagggcttt 534
Query: 358 attagaattaccagttgagtcctagagttgagggattcataacgcaaaactaatggacag 417
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 535 attagaattaccagttgagtcctagagtcgagggattcataacgcaaaactaatggacag 594
Query: 418 caatagtggagacactcatctcagcaccaactcaagtttcagtatgtgtccttaaagggt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 caatagtggagacactcatctcagcaccaactcaagtttcagtatgtgtccttaaagggt 654
Query: 478 taaaactcctggtacttttaatcaagttatatatgatactcgatttctaggtgactcaag 537
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 taaaactcttggtacttttaatcaagttatatatgatactcgatttctaggtgactcaag 714
Query: 538 aaaaacatgaagccctagatccacac------------------------agacagaggt 573
|||||||||||||| ||||||||||| ||||||||||
Sbjct: 715 aaaaacatgaagcc-tagatccacactgcagatcagactgttgtgccctcagacagaggt 773
Query: 574 ttctacatgtctgggcctctgctgtcaactcaataagtggccctgagcagctagcctccc 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttctacatgtctgggcctctgctgtcaactcaataagtggccctgagcagctagcctccc 833
Query: 634 gaaggggcctttctgctttaaaatccactttgtctataattctaggacaccaaaattacg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gaaggggcctttctgctttaaaatccactttgtctataattctaggacaccaaaattacg 893
Query: 694 tttaacacacaatttcaatgacttataagaagcaaatgacatgtg 738
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 894 tttaacacacaatttcaatgacttataagaaacaaatgacatgtg 938
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 738
Length of database: 1138
Length adjustment: 10
Effective length of query: 728
Effective length of database: 1128
Effective search space: 821184
Effective search space used: 821184
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
