Query= MSMg01no135_g02.b1 MSMg01no135_g02.b1 CHROMAT_FILE:
MSMg01no135_g02.b1 PHD_FILE: MSMg01no135_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:30 2005
(101 letters)
>mm_chr15_27765937_27766437
Length = 501
Score = 188 bits (97), Expect = 1e-52
Identities = 100/101 (99%)
Strand = Plus / Minus
Query: 1 aaccttagctctagcaggatagtctttcaatttgttacacaaattcaaattaaagccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaccttagctctagcaggatagtctttcaatttgttacacaaattcaaattaaagccaag 242
Query: 61 aagaatgtacacatcttaattacttatacttacttactaag 101
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 aagaatgtacacatcttaattacttagacttacttactaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 501
Length adjustment: 8
Effective length of query: 93
Effective length of database: 493
Effective search space: 45849
Effective search space used: 45849
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no135_g02.g1 MSMg01no135_g02.g1 CHROMAT_FILE:
MSMg01no135_g02.g1 PHD_FILE: MSMg01no135_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:30 2005
(369 letters)
>mm_chr15_27626926_27627694
Length = 769
Score = 640 bits (331), Expect = 0.0
Identities = 358/371 (96%), Gaps = 11/371 (2%)
Strand = Plus / Plus
Query: 1 tctctcattgccctctcccaccccccctccgtcttctgatgaaatctttctaagaaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctcattgccctctcccaccccccctccgtcttctgatgaaatctttctaagaaatct 260
Query: 61 ccctcctactttcgtgtccttttctgatgtacgtgcaacccattgatactaagactgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctcctactttcgtgtccttttctgatgtacgtgcaacccattgatactaagactgata 320
Query: 121 gagcccacgatttccagtctgctttctttattttacttacatggc-agatgtgcaggggt 179
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 321 gagcccacgatttccagtctgctttctttattttacttacatggcta-atgtgcaggggt 379
Query: 180 ggccacaacacagctcccatcccagtgctgttctgtggtcctgcttttccatcctctgtg 239
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 ggccacaacacagctcccatcccagtgctgttctgtggtcctgattttccatcctctgtg 439
Query: 240 tcttctctgtggtttatctccaaggattcacatgtccagcgcatgatgctcagt-atgtc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 gcttctctgtggtttatctccaaggattcacatgtccagcgcatgatgctcagtga---- 495
Query: 299 agtgctgggatgctagaactctgaagaaaatggtgagcatttgatcaagtgatttgatct 358
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 a----tgggatgctagaactctgaagaaaatggtgagcatttgatcaagtgatttgatct 551
Query: 359 cttgaccattg 369
|||||||||||
Sbjct: 552 cttgaccattg 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
