Query= MSMg01no137_b13.b1 MSMg01no137_b13.b1 CHROMAT_FILE:
MSMg01no137_b13.b1 PHD_FILE: MSMg01no137_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:40 2005
(297 letters)
>mm_chr15_71466723_71467419
Length = 697
Score = 447 bits (231), Expect = e-130
Identities = 271/293 (92%), Gaps = 14/293 (4%)
Strand = Plus / Plus
Query: 4 ggaattctgtatcaatatcgcagatgtcacccagtccttttattgggttttaagagatta 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtatcaagattgcagatgtcacccagtccttttattgggttttaagagatta 263
Query: 64 acatgatcatatctctatcatatgaaatgatcaagtgaagaggttaaaggaatgaagaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acatgatcatatctctatcatatgaaatgatcaagtgaagaggttaaaggaatgaagaag 323
Query: 124 gtcccccaagacttgttccaaagcagagtatatatcgatttcatcatctacttaacctaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcccccaagacttgttccaaagcagagtatatatcgatttcatcatctacttaacctaa 383
Query: 184 cacacacacacacacacacacacacacacacacacacacacacacacacagagcgagaga 243
|||||||||||||||||||||||||||| | | | | ||| ||||||
Sbjct: 384 cacacacacacacacacacacacacacagagagaga--------------gagagagaga 429
Query: 244 gagagagagagagagagagagagagagggagggagaaagagagggagggagag 296
||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 430 gagagagagagagagagagagagagagagagggagaaagagagggagggagag 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_b13.g1 MSMg01no137_b13.g1 CHROMAT_FILE:
MSMg01no137_b13.g1 PHD_FILE: MSMg01no137_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:40 2005
(659 letters)
>mm_chr15_71591507_71592565
Length = 1059
Score = 1122 bits (580), Expect = 0.0
Identities = 580/580 (100%)
Strand = Plus / Minus
Query: 80 gtgattgttaaccacagtcagtgcttgacttctgcctttagttggtgttcttttgcttca 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 gtgattgttaaccacagtcagtgcttgacttctgcctttagttggtgttcttttgcttca 1000
Query: 140 tgtcccttcttatttttcctcccatatgtctgtctgtccatgtctccttccccctttctt 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 tgtcccttcttatttttcctcccatatgtctgtctgtccatgtctccttccccctttctt 940
Query: 200 cttttcttccttccttctccctccattattcttcttccttcctatctttttctccccctc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 cttttcttccttccttctccctccattattcttcttccttcctatctttttctccccctc 880
Query: 260 cctctacatctccttttcctccatatttctttttctgccttctttcttctctacatttat 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 cctctacatctccttttcctccatatttctttttctgccttctttcttctctacatttat 820
Query: 320 ctgcctctcttctttacccccactttatgcttttctgaaaagaggaatacatacattatt 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ctgcctctcttctttacccccactttatgcttttctgaaaagaggaatacatacattatt 760
Query: 380 gggagagattatcttttaacccatttctttacttcttggctcatggttaagatgggggta 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gggagagattatcttttaacccatttctttacttcttggctcatggttaagatgggggta 700
Query: 440 atgtttgcagcaacatttcaactcccaaggtcagaggggaggtgtctgctttattgtcat 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 atgtttgcagcaacatttcaactcccaaggtcagaggggaggtgtctgctttattgtcat 640
Query: 500 aaggcatgattaattccacatatccctttagtcttgatcttctgatgtggtgaggacata 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaggcatgattaattccacatatccctttagtcttgatcttctgatgtggtgaggacata 580
Query: 560 tctactcctcttggttgctcatgattccaaggtcttgcccaaggtgttggtgaagcatct 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tctactcctcttggttgctcatgattccaaggtcttgcccaaggtgttggtgaagcatct 520
Query: 620 agttagagtgaggtatcaatccctgctgtagctgtttgga 659
||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 agttagagtgaggtatcaatccctgctgtagctgtttgga 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
