Query= MSMg01no139_h07.b1 MSMg01no139_h07.b1 CHROMAT_FILE:
MSMg01no139_h07.b1 PHD_FILE: MSMg01no139_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:52 2005
(611 letters)
>mm_chr15_95444130_95445140
Length = 1011
Score = 1040 bits (538), Expect = 0.0
Identities = 591/610 (96%), Gaps = 3/610 (0%)
Strand = Plus / Plus
Query: 5 gaattcttctggcatacccaacagaatggatataaaaaaaggctttgtcttagttagggt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcttctggcatagccaacagaatggatataaaaaaaggctttgtcttagttagggt 261
Query: 65 tttactactgtgaacagacaccatgaccaaggcaagtcttacaaagacaacatttagttg 124
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 tttactcctgtgaacagacaccatgaccaaggcaagtcttacaaagacaacgtttagttg 321
Query: 125 gggctggcttacaggttcagaggttcagtccacgatcatcaaggtgggagcatggcagca 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 322 gggctggcttacaggttcagaggttcagttcacgatcatcaaggtgggagcatggcaaca 381
Query: 185 ttcagataggcatggtgcaggag---ctgagagctttttagcttcatctgaaggttgtta 241
| ||| ||| |||||| ||||| |||||||||||||||||||||||||||| |||||
Sbjct: 382 tccaggcaggtatggtgtaggaggagctgagagctttttagcttcatctgaaggctgtta 441
Query: 242 gaagaagactggcttccaggcagctaggactagggtattaaagcccacacccacaatgac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaagaagactggcttccaggcagctaggactagggtattaaagcccacacccacaatgac 501
Query: 302 acacctactccaacaaggccacacctcctaatagtgccactcccagggccaagcatatac 361
||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 502 acacccactctaacaaggccacacctcctaatagtgccattcccagggccaagcatatat 561
Query: 362 aatccatcacaggcaccacgtcatggttagatactacaaccattgtgtagggaaagtccc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aatccatcacaggcaccacgtcatggttagatactacaaccattgtgtagggaaagtccc 621
Query: 422 catgcatgcacagccagcttgctaaactttatgcttttgtactcactgataaaataaatt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catgcatgcacagccagcttgctaaactttatgcttttgtactcactgataaaataaatt 681
Query: 482 cttcttcctcctctggagaagagagcaacatctaccatacagggctgaatctgaatgaga 541
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 682 cttcttcctcctctggagaagagagcaacatctaccatacagggttgaatctgaatgaga 741
Query: 542 aagtccaggtcatattgcctccccaggagtagaaggcagactagggatatcttccaattt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aagtccaggtcatattgcctccccaggagtagaaggcagactagggatatcttccaattt 801
Query: 602 tatacttagt 611
||||||||||
Sbjct: 802 tatacttagt 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_h07.g1 MSMg01no139_h07.g1 CHROMAT_FILE:
MSMg01no139_h07.g1 PHD_FILE: MSMg01no139_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:52 2005
(640 letters)
>mm_chr15_95467790_95468833
Length = 1044
Score = 1193 bits (617), Expect = 0.0
Identities = 631/639 (98%), Gaps = 8/639 (1%)
Strand = Plus / Minus
Query: 10 actgggttaaccagggtgtggctaatgagctttacatttgcagcatt----aaaaaaaaa 65
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1044 actgggttaaccagggtgtggctaatgagctttacatttgcagcattaaaaaaaaaaaaa 985
Query: 66 aaagagagagaaaagaaaagaaaaagctcaaggaatttactagactttctttttttaaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 aaagagagagaaaagaaaagaaaaagctcaaggaatttactagactttctttttttaaaa 925
Query: 126 aaaataataagtgtttatatccaagtcactaaattattttccattgcagaaaaaaagaga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aaaataataagtgtttatatccaagtcactaaattattttccattgcagaaaaaaagaga 865
Query: 186 gagagagagagaaagagagaaaatgaactgttcaagtaagcttgtgttaagtttccactt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gagagagagagaaagagagaaaatgaactgttcaagtaagcttgtgttaagtttccactt 805
Query: 246 gaacagccaaaagtagggatgagagctaaaactttgaccaagcgacgaagctgatggcta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaacagccaaaagtagggatgagagctaaaactttgaccaagcgacgaagctgatggcta 745
Query: 306 ccattcttgcctcagaaggttgactctgctctttcccagagcacaggatcagctcagcac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccattcttgcctcagaaggttgactctgctctttcccagagcacaggatcagctcagcac 685
Query: 366 atctggagcagggcaagggaagtgctgcttccactcccagtgcgatgtgattgcttaaca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atctggagcagggcaagggaagtgctgcttccactcccagtgcgatgtgattgcttaaca 625
Query: 426 tcttcgattggagttttcctgacccctcagatttagggctgactccctgttgcaaatgtg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcttcgattggagttttcctgacccctcagatttagggctgactccctgttgcaaatgtg 565
Query: 486 gaagccattgttcgctcaatgtccttctcacatgcagtaaacactttaacaagacacgga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaagccattgttcgctcaatgtccttctcacatgcagtaaacactttaacaagacacgga 505
Query: 546 gaacagtagag-aaaaaaaatcgaaaggcacccataaaaggtggtccctcccctaaagca 604
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaacagtagagaaaaaaaaatcgaaaggcacccataaaaggtggtccctcccctaaagca 445
Query: 605 ttgcatgg---aaaaaaaaaacctttgatattacactca 640
|||||||| ||||||||||||||||||||||||||||
Sbjct: 444 ttgcatggaaaaaaaaaaaaacctttgatattacactca 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1044
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1034
Effective search space: 651420
Effective search space used: 651420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
