NGGTCATAATTTGCGGCGCTAAACGACTCCTATTCGGAGAGATCCGCGGA
ATTCAGGACTCACTGAGAAGACAAATCTATGGATGATAGGAGTAGAGGAG
AATGAAGATTTTCAACTTAAATGGCCAGCATATATCTTCAACAAAATTAT
AGAAGAAAACTTCCCAAACCTAAAGAGATGCTCATGAACATACAAGAAGC
CTACAAAACTCCAAATAGATTGGACCAGAAAAGAAATTCCTCCCAAAACA
TAATAATCAGAACAACAAATGCACAAAATAAAGACAGGGTATTAAAAGCA
GTAAGGGGAAAATGTCAAGTAACATATAAAGGCAGGCCTATTAGAATTAC
TCCAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATCCCAGATAGAAG
TTATTCAGACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACCCA
GCAAGACTCTCAATCACCATAGATAGAGAAAACAAAGTATTCAGTTTGGA
GCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCA
TCCCATAATTAGCCTCCAAACGATGACACAATTGCATATACTAGCAAGCC
TTTGTTGCAAGGACCGTGATATAGCTGTCTCTTGTGAGACTAGGCCGGGG
CCTAGCAAACACAGAAGTGGATGCTCACAGTCAACTATTGGATGGATCAC
AGGGCC

NCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCCTTCTTTACAAACTACTAGTTTT
CAACTGTCAGACTATTTCTAATTAGTATGTAAATGAACTTCTATTTCTGT
TGCTCCAAACACTAAAAGGAACATCTCTGAATTCCTCATTTCATTCTTCT
TTTATAACAGGACTTCTCAAAGAACTGTCTTCATTTATTGTCTCTAGTTT
CTTTTCTCTCATTTCCTTAAAGCACTCCATTTACTCTTTCTCTATGTGAG
GAGAAAAAATAAAACTTTTTTTTTCAGTTATTTCTATTTGATGATCAGCC
ACAATTCCTATAACAACACACATATAAATGAGAATAACATAGAAAATAAT
AAACAGAGAAAATCATACAAATGTAAATACTATTTTAAAAGAGTTATGAC
ATTTTAGAAATGAAGACCTAAAGGAACAAGGATGTCTGTATGCTTGTTTG
GACAACACAGAAATATGGTTAGAGGATGAAAATATGTTATGTGGTCATAA
ACCAAGGGTGACTTAGAAAAGATGGCTGAAATCCCCCTGTGTTCTCTGTG
TCTTCAAAGAAAAAGACATTGCGTCCCTCGAGGTTCAGCATGGATACCCC
TAGGATGGAACACCGTCATTTTTAGAGGAAAGTCAAAGAAGTCAGCTATG
GTGTCT

Query= MSMg01no139_o14.g1 MSMg01no139_o14.g1 CHROMAT_FILE:
MSMg01no139_o14.g1 PHD_FILE: MSMg01no139_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:28 2005
         (632 letters)



>mm_chr15_11360035_11361069
          Length = 1035

 Score = 1100 bits (569), Expect = 0.0
 Identities = 614/635 (96%), Gaps = 13/635 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcccttctttac-aaactactagttttcaactgtcagactatttctaattagtatgtaaa 59
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccttctttaccaaactactagttttcaactgtcagactatttctaattagtatgtaaa 260

                                                                       
Query: 60  tgaacttctatttctgttgctccaaacactaaaaggaacatctctgaattcctcatttca 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacttctatttctgttgctccaaacactaaaaggaacatctctgaattcctcatttca 320

                                                                       
Query: 120 ttcttcttttataacaggacttctcaaagaactgtcttcatttattgtctctagtttctt 179
           |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 321 ttcttcttttataacaggacttctcaaagaactgtcttcatttactgtctccagtttctt 380

                                                                       
Query: 180 ttctctcatttccttaaagcactccatttactctttctctatgtgaggagaaaaaataaa 239
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ttctctcatttccttaaagcactccatttactttttctctatgtgaggagaaaaaataaa 440

                                                                       
Query: 240 acttttttttt-cagttatttctatttgatgatcagccacaattcctataacaacacaca 298
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttttttttttcagttatttctatttgatgatcagccacaattcctataacaacacaca 500

                                                                       
Query: 299 tataaatgagaataacatagaaaataataaacagagaaaatcatacaaatgtaaatacta 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataaatgagaataacatagaaaataataaacagagaaaatcatacaaatgtaaatacta 560

                                                                       
Query: 359 ttttaaaagagttatgacattttagaaatgaagacctaaaggaacaaggatgtctgtatg 418
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaaaagagttatgatgttttagaaatgaagacctaaaggaacaaggatgtctgtatg 620

                                                                       
Query: 419 cttgtttggacaacacagaaatatggttagaggatgaaaatatgtta-tgtggtcataaa 477
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 cttgtttggacaacacagaaatatggttagaggatgaaaatatgttactgtggtcataaa 680

                                                                       
Query: 478 ccaagggtgacttagaaaagatggctgaaatccccctgtgttctctgtgtcttcaaagaa 537
           ||||||||||||||||||||||          || |||||||||||| ||||||||||||
Sbjct: 681 ccaagggtgacttagaaaagat----------cctctgtgttctctgcgtcttcaaagaa 730

                                                                       
Query: 538 aaagacattgcgtccctcgaggttcagcatggatacccctaggatggaacaccgtcattt 597
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aaagacattgcttccctcgaggttcagcatggatacccctaggatggaacaccgtcattt 790

                                              
Query: 598 ttagaggaaagtcaaagaagtcagctatggtgtct 632
           |||||||||||||||||||||||||||||||||||
Sbjct: 791 ttagaggaaagtcaaagaagtcagctatggtgtct 825


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1035
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1025
Effective search space:   637550
Effective search space used:   637550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)