Query= MSMg01no140_o05.b1 MSMg01no140_o05.b1 CHROMAT_FILE:
MSMg01no140_o05.b1 PHD_FILE: MSMg01no140_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:45 2005
(534 letters)
>mm_chr15_39030547_39031480
Length = 934
Score = 1025 bits (530), Expect = 0.0
Identities = 533/534 (99%)
Strand = Plus / Minus
Query: 1 gtggtgaaggtcagtaagctatttcttttcaaggaggaagtcaacgcttttagttgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gtggtgaaggtcagtaagctatttcttttcaaggaggaagtcaacgcttttagttgtgtg 675
Query: 61 tttctatagcgattatgggaaagtgtattcggtgacatgcaagagaactgccctccctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttctatagcgattatgggaaagtgtattcggtgacatgcaagagaactgccctccctct 615
Query: 121 ctttaggcatatacaggttaatttttatagtgagtaacgacttggacaaacattaaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctttaggcatatacaggttaatttttatagtgagtaacgacttggacaaacattaaaggg 555
Query: 181 ttacagatctttacagatccagacaatgactttccagaagcaaccgagatataaaaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttacagatctttacagatccagacaatgactttccagaagcaaccgagatataaaaaatc 495
Query: 241 ataaaacatttaaaagcaaacctgtagaaacaatctcagctacagtgctacactgacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ataaaacatttaaaagcaaacctgtagaaacaatctcagctacagtgctacactgacaag 435
Query: 301 gaatcccaaagtaaaggaaaactcattctggacagttccctggtgctgaagttacaccgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaatcccaaagtaaaggaaaactcattctggacagttccctggtgctgaagttacaccgc 375
Query: 361 ctctaaaccgatgcttgggtgctactttcacgcctcccaccctcgccaaaaccccgctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctctaaaccgatgcttgggtgctactttcacgcctcccaccctcgccaaaaccccgctgg 315
Query: 421 ctggactgtgagcaaacatagtagaacttcacaagcagggagcaacccaaactgcctcga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 314 ctggactgtgagcaaacatagtagaacttcacaagcagggagcaacccaaactgccacga 255
Query: 481 tggtaggaagtggagtctcctcgggatcctacagatttactagttgcaaacagg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tggtaggaagtggagtctcctcgggatcctacagatttactagttgcaaacagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_o05.g1 MSMg01no140_o05.g1 CHROMAT_FILE:
MSMg01no140_o05.g1 PHD_FILE: MSMg01no140_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:46 2005
(575 letters)
>mm_chr15_38962692_38963666
Length = 975
Score = 1054 bits (545), Expect = 0.0
Identities = 569/583 (97%), Gaps = 10/583 (1%)
Strand = Plus / Plus
Query: 1 tgttctcagcctccacattaggcacctcacaatcaaccacctgtaacttgtgtctcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgttctcagcctccacattaggcacctcacaatcaaccacctgtaacttgtgtctcagga 250
Query: 61 atgtgatgccctcttctggcttctgccggcgcctgcacttgtgtagtgcacatagagatg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgtgatgccctcttctggcttctgccggcgcctgcacttgtgtagtgcacatagagata 310
Query: 121 aggaagcacacacacacacacacacacacacacaca----------taagtaaagagtaa 170
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 311 aggaagcacacacacacacacacacacacacacacacacacacacataagtaaagagtaa 370
Query: 171 gtgtccagtgtatgtgacagctcatacacggaccacaggctgctttcacccaggaactga 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtgtccagtgtatgtgacagctcatacacggaccacaggctgctttcacccaggaactga 430
Query: 231 agctctcaggatttcccatactgagaaggagcagaggtgattccttaatcagcaatgccc 290
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 431 agctctcaggatttcccagactgagacggagcagaggtgattccttaatcagcaatgccc 490
Query: 291 agccgcattgaagcctttgcttactgtaatggatgctttgaaataaaatggtcctgttac 350
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agccgcgttgaagcctttgcttactgtaatggatgctttgaaataaaatggtcctgttac 550
Query: 351 cattgaaggcagtaaaagacaagagaacactgcagcatggtgacctaagctaagatttcc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cattgaaggcagtaaaagacaagagaacactgcagcatggtgacctaagctaagatttcc 610
Query: 411 aaagtacactgtgagctagttgtttccccagatcatctcttttcagagccgctttggaat 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aaagtacactgtgagctagttgtttccccagatcatctcttttcagagccgctttggaat 670
Query: 471 ttctcttttcttcccttggaaagattatatacagttcctaaaacatgtctcttaaaagaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttctcttttcttcccttggaaagattatatacagttcctaaaacatgtctcttaaaagaa 730
Query: 531 atagctgctagttttccctaattgtccttatttttgaaatatt 573
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atagctgctagttttccctaattgtccttatttttgaaatatt 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
