Query= MSMg01no142_b03.b1 MSMg01no142_b03.b1 CHROMAT_FILE:
MSMg01no142_b03.b1 PHD_FILE: MSMg01no142_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:15 2005
(773 letters)
>mm_chr15_66202394_66203567
Length = 1174
Score = 453 bits (234), Expect = e-131
Identities = 326/404 (80%), Gaps = 73/404 (18%)
Strand = Plus / Minus
Query: 11 gaatt-caaccctctgcaaaaagcaatgagcctttgaacctctgagccatctctctgacc 69
||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 404 gaattccaaccctctgcaaaaagtaatgtgcctttgaacctctgagccatctctctgacc 345
Query: 70 tctccagtttcttcttctccaaggtgattccagtttccccatttccttggaagtactaga 129
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctcaagtttcttcttctccaagttgattccagtttccccatttccttggaagtactaga 285
Query: 130 tttctctacaaaaatgaccaagcctaaattttctattaaatctatgcctggtcatgacca 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tttctctacaaaaatgaccaagcctaaattttctattaaatctatgcctggtcatgacca 225
Query: 190 tttagatcctgaca---------------------------------------------- 203
||||||||||||||
Sbjct: 224 tttagatcctgacattctttctttctttctttcttccttccttcctttctttctttcttt 165
Query: 204 --------------------------ttctttctttctttctttcttagatattttctcc 237
||||||||||||||||||||||||||||||||||
Sbjct: 164 ctttctttctttctttctttctttctttctttctttctttctttcttagatattttctcc 105
Query: 238 atttacatttccaatgctatcccaaaagtcccccataccctctccccccactcccctacc 297
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 104 atttacatttccaatgctatcccaaaagtcccccataccctctccccccaatcccctacc 45
Query: 298 cacccactctcacttcttggccctggtgttcccctgtactgagg 341
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cacccactctcacttcttggccctggtgttcccctgtactgagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 773
Length of database: 1174
Length adjustment: 10
Effective length of query: 763
Effective length of database: 1164
Effective search space: 888132
Effective search space used: 888132
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no142_b03.g1 MSMg01no142_b03.g1 CHROMAT_FILE:
MSMg01no142_b03.g1 PHD_FILE: MSMg01no142_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:15 2005
(672 letters)
>mm_chr15_66126765_66127836
Length = 1072
Score = 1230 bits (636), Expect = 0.0
Identities = 663/672 (98%), Gaps = 1/672 (0%)
Strand = Plus / Plus
Query: 1 agaagaagctaagagtgggtgttaagagtgccacaggaggttgtgggtacctacacaatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 201 agaagaagctaagagtgggtgttaagagtgggacaggaggttgtgggtacgtacacaatg 260
Query: 61 atggacagaagtcaagctattgaaacaacctgttccaagaaggaattctgcacaccccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggacagaagtcaagctattgaaacaacctgttccaagaaggaattctgcacaccccta 320
Query: 121 atgccaaatgtttgaccatgggcaggttcaatgattggtcctcagctcccctgtaacgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgccaaatgtttgaccatgggcaggttcaatgattggtcctcagctcccctgtaacgta 380
Query: 181 ggaatactattaattactttgaaaggatatgtcagtattaagagagttaacacctgtcaa 240
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 381 ggaatactattaattactttgaaaggctatttcagtattaagagagttaacacctgtcaa 440
Query: 241 acttgccacatggacttaatacctgcttactgacaaaactatgaatattattgcattcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttgccacatggacttaatacctgcttactgacaaaactatgaatattattgcattcag 500
Query: 301 agtttttaatactacacatagttattaatactacatccaatttagaagagaacttttggg 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 agtttttaatactacacatagttattaatactacatccaatttagaagaaaacttttggg 560
Query: 361 tgccaagtccaatattgattcaacactgacccacattttatagaacagctcagctgtata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgccaagtccaatattgattcaacactgacccacattttatagaacagctcagctgtata 620
Query: 421 ttatgatacacacgtaatgaactgaagtgctttctgtttgtatttatagaaacctgagtg 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatgatacacaggtaatgaactgaagtgctttctgtttgtatttatagaaacctgagtg 680
Query: 481 tagacattagtttgctaagattgctgtgacaaaaccaccctggctgatgtatgccaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagacattagtttgctaagattgctgtgacaaaaccaccctggctgatgtatgccaccaa 740
Query: 541 aagggctttctcacaacctggaagctgaagaatgacagccacatgcaatgctactgggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagggctttctcacaacctggaagctgaagaatgacagccacatgcaatgctactgggac 800
Query: 601 ctgcagaggatgttctctatggctttccaggaaaatgacatcctgtttatggtctccccg 660
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 801 ctgcagaggatgctctctatggctttc-aggaaaatgacatcctgtttatggtctccccg 859
Query: 661 cttggttttggg 672
||||||||||||
Sbjct: 860 cttggttttggg 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
