Query= MSMg01no145_p08.b1 MSMg01no145_p08.b1 CHROMAT_FILE:
MSMg01no145_p08.b1 PHD_FILE: MSMg01no145_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:12 2005
(553 letters)
>mm_chr15_95528071_95529019
Length = 949
Score = 969 bits (501), Expect = 0.0
Identities = 536/551 (97%), Gaps = 8/551 (1%)
Strand = Plus / Minus
Query: 5 gaattccctgagagttcatgttgttgaataaaaatactttaaaatatgttaaaattgtgt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gaattccctgagagttaatgttgttgaataaaaatactttaaaatatgttaaaattgtgt 815
Query: 65 gtgtatgtctgtatttgtgtgtctgtgtgtgcatgagcaggtgtgtgtatgtgcgtgtgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gtgtatgtctgtatttgtgtgtctgtgtgtgcatgagcaggtgtgtgtatgtgcgtgtgc 755
Query: 125 atgtgcacacacactgatgtgtgcacagaggcagaggagaatgccaggtgtcctgttatc 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 754 atgtgcacacacactgatgtgtgcacagaggcagaggaggatgccaggtgtcctgttatc 695
Query: 185 attctttaccttactcccttcagacaagacccctcgtagagcttggagtgaggctggtga 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 attctttaccatactcccttcagacaagacccctcgtagagcttggagtgaggctggtga 635
Query: 245 gccgctg--actgctccacagctagggagagaggtgttaacttggccagtgttatgcatg 302
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gccgctgtctctgctccaca--tagggagagaggtgttaacttggccagtgttatgcatg 577
Query: 303 gtgctctggattcaaactcaagcctgctctctcccacagacataacttttatctgacgag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gtgctctggattcaaactcaagcctgctctctcccacagacataacttttatctgacgag 517
Query: 363 ctttctctgcaccccaaatcctattgggctaataagaattgtgcctgaaattcaaatgta 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctatctctgcaccccaaatcctattgggctaataagaattgtgcctgaaattcaaatgta 457
Query: 423 accacgcaactcagtgtgctgcctttctgtcaagtggggacttgtggggagtagaaatag 482
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 accacacacctcagtgtgctgcctttctgtcaagtggggacttgtggggagtagaaatag 397
Query: 483 cgattttaatcactgatccaggtaccttggacagtgtctggactaatgtagccctcaagc 542
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 396 cgattttaatcactgatccaggtaccttggacag----tggactaatgtagccctcaagc 341
Query: 543 aacacttgtca 553
|||||||||||
Sbjct: 340 aacacttgtca 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 949
Length adjustment: 10
Effective length of query: 543
Effective length of database: 939
Effective search space: 509877
Effective search space used: 509877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_p08.g1 MSMg01no145_p08.g1 CHROMAT_FILE:
MSMg01no145_p08.g1 PHD_FILE: MSMg01no145_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:12 2005
(538 letters)
>mm_chr15_95468650_95469586
Length = 937
Score = 1019 bits (527), Expect = 0.0
Identities = 535/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1 tttacggacatcaagagagcaccgtattactagttgctgccaatgtgaatgaacattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttacggacatcaagagagcaccgtattactagttgctgccaatgtgaatgaacattata 260
Query: 61 aataggaaaataagacattcatctcggagttataagtaataatgggacacggcgccattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataggaaaataagacattcatctcggagttataagtaataatgggacacggcgccattt 320
Query: 121 attaaaaacacatgtgggttctctaaatggtcttcgatggccaacattcggagggcagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaaaaacacatgtgggttctctaaatggtcttcgatggccaacattcggagggcagac 380
Query: 181 aagtcaagggcagtatattctatcgttgatctgaaccacactgatctttcaagccaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtcaagggcagtatattctatcgttgatctgaaccacactgatctttcaagccaagtg 440
Query: 241 gtttccccgcccccaccccaagataaacatggggcttggagccctgagggatgagtgtca 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtt-ccccgcccccaccccaagataaacatggggcttggagccctgagggatgagtgtca 499
Query: 301 tttaccacagctctgcagagggcactgggtgtgaagggctgagaaataatgagaaaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttaccacagctctgcagagggcactgggtgtgaagggctgagaaataatgagaaaaaac 559
Query: 361 acaaccttcttaaaataatcattggcgctcttgggaagatgacgggctctagtaaacctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acaaccttcttaaaataatcattggcgctcttgggaagatgacgggctctagtaaacctc 619
Query: 421 cccagtgcgtttttttccttattcattaaactggcccaaacgtttatgggttagagactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cccagtgcgtttttttccttattcattaaactggcccaaacgtttatgggttagagactc 679
Query: 481 ttnaaacactgctttaaaataaatacactgcaccgccacgtatacccacatgcctgag 538
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 ttaaaacactgctttaaaataaatacactgcaccgccatgtatacccacatgcctgag 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
