Query= MSMg01no146_h12.b1 MSMg01no146_h12.b1 CHROMAT_FILE:
MSMg01no146_h12.b1 PHD_FILE: MSMg01no146_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:16 2005
(599 letters)
>mm_chr15_43197579_43198577
Length = 999
Score = 1131 bits (585), Expect = 0.0
Identities = 597/603 (99%), Gaps = 4/603 (0%)
Strand = Plus / Plus
Query: 1 tgggattgcaatagagcacatcaggatttttattgcctgttggactcatctcgagttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgggattgcaatagagcacatcaggatttttattgcctgttggactcatctcgagttatt 256
Query: 61 atataaaagaaaccacacacacacacacacacacacacacacacacacacacacacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atataaaagaaaccacacacacacacacacacacacacacacacacacacacacacacac 316
Query: 121 a----atcatttgtgttacatagagtaaggggacagctgatgaaagacatgacccatgga 176
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 acacaatcatttgtgttacatagagtaaggggacagctgatgaaagacatgacccatgga 376
Query: 177 cattttgaacagattattttgtaattgttcatatttcttggtttatttacccactggctg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cattttgaacagattattttgtaattgttcatatttcttggtttatttacccactggctg 436
Query: 237 ttctgaaagttattttagaacagttgaagcaatatttcagcattcaaaattctgtcgttg 296
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 437 ttctgaaagttattttagaacagttgaagcaatattccagcattcaaaattctgtcgttg 496
Query: 297 gacagagggtgtagcccctgaaacaggtctttcaaatgatgcgtgcagatatatgaaata 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gacagagggtgtagcccctgaaacaggtctttcaaatgatgcgtgcagatatatgaaata 556
Query: 357 tgcaatatcctagaaattcgaatagctggatcttagtctagactctgttctgccattatc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 557 tgcaatatcctagaaattcgaatagctggatcttagtctagactctgttctgctattatc 616
Query: 417 tggcttagtatctcagacattgctggaccatggttttctcatctgtcagatctcagtagg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tggcttagtatctcagacattgctggaccatggttttctcatctgtcagatctcagtagg 676
Query: 477 gggtgccaaataatttttaatgttcctttcgattctaatcagtatcaaaagttgtggtac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gggtgccaaataatttttaatgttcctttcgattctaatcagtatcaaaagttgtggtac 736
Query: 537 aacatgtctggcagacccaaaatttcttttccagttctcttgttagctgtttccaagtaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aacatgtctggcagacccaaaatttcttttccagttctcttgttagctgtttccaagtaa 796
Query: 597 tgg 599
|||
Sbjct: 797 tgg 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_h12.g1 MSMg01no146_h12.g1 CHROMAT_FILE:
MSMg01no146_h12.g1 PHD_FILE: MSMg01no146_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:17 2005
(633 letters)
>mm_chr15_43338512_43339543
Length = 1032
Score = 911 bits (471), Expect = 0.0
Identities = 501/511 (98%), Gaps = 1/511 (0%)
Strand = Plus / Minus
Query: 1 cctccaacaatcacacacngcttgacttttcctgtatgcaaaaccgtccgcatcgtttca 60
|||||||||||||||||| ||||||||||| || |||||||||||| |||||||||||
Sbjct: 510 cctccaacaatcacacac-gcttgacttttgatgcatgcaaaaccgtatgcatcgtttca 452
Query: 61 tccaaataaataaccgtccaaagtcctgtaattacaagccagcggggaatcttaatctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tccaaataaataaccgtccaaagtcctgtaattacaagccagcggggaatcttaatctct 392
Query: 121 acccaacctaatgttctttgctctgcctcattcgcaggatcggtatcttgagaggcagtg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 391 acccaacctaatgttctttgctctgcctcattcgcagaatcggtatcttgagaggcagtg 332
Query: 181 gagattagggggaaagaaaattacacaattgacacttgaatgtcattttacaaatctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gagattagggggaaagaaaattacacaattgacacttgaatgtcattttacaaatctggc 272
Query: 241 ttctgacaactttttcacaattttaagagaaaaataaattacttatgaacctttaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttctgacaactttttcacaattttaagagaaaaataaattacttatgaacctttaaaaaa 212
Query: 301 taaaataggtgttaataattttactttataataaaattatttaaaacttatattttaaag 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 211 taaaataggtgttaataaaagtactttataataaaattatttaaaacttatattttaaag 152
Query: 361 ttataaaatgataaatatagaaattaatgttattaattcatgaattcttcaaataactat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ttataaaatgataaatatagaaattaatgttattaattcatgaattcttcaaataactat 92
Query: 421 ttgataacctgatcgttgtttatcaggtactgtgccaataaaaaaatgacaaaaataaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ttgataacctgatcgttgtttatcaggtactgtgccaataaaaaaatgacaaaaataaaa 32
Query: 481 caggaaataaatcattccttatagtagctat 511
|||||||||||||||||||||||||||||||
Sbjct: 31 caggaaataaatcattccttatagtagctat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
