Query= MSMg01no147_n09.b1 MSMg01no147_n09.b1 CHROMAT_FILE:
MSMg01no147_n09.b1 PHD_FILE: MSMg01no147_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:32 2005
(433 letters)
>mm_chr15_84567276_84568109
Length = 834
Score = 688 bits (356), Expect = 0.0
Identities = 410/428 (95%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 7 gaattcacttattgccagtttgcacagaccaaggagagaaataacataatttgttgttat 66
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaattcacttatagttagtttgcacagaccaaggagagaaataacataatttgttgttat 575
Query: 67 ttatcttacaatgtatagaaatccatgagataaaggccagagctacgcagatgctgctgt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttatcttacaatgtatagaaatccatgagataaaggccagagctacgcagatgctgctgt 515
Query: 127 gacatggctgaacctgtcccctcctga-ggggggacactgcacctcaggctacctctatc 185
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 514 gacatggctgaacctgtcccctcctgagggggggacactgcacctcaggctacctctatc 455
Query: 186 ttgattttcagaaggaagggcacacgtctctatttagaactcaggacgtctcctctgtcc 245
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 454 ttgattttcagaaggaagggcacacgtctctatttagaactcatgatgtctcctctgtcc 395
Query: 246 tacatcccatctcattcatatcaggacacgtgttaacagcccctggctgctcattagacc 305
|||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 394 cacatcctgtctcattcatatcaggacacgtggcaacagccccttgctgctcattagacc 335
Query: 306 tcagcatcagtctgcaggtttctccacacacacaaagcctgagtcctatagaacagccac 365
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcagcatcagtctgcaggttcctacacacacacaaagcctgagtcctatagaacagccac 275
Query: 366 catccgcgtctcccaccaccctctgcttccccgcaccagagagactctgtcctccctccc 425
|||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 274 catctgtgtctcccagcaccctctgcttccctgcaccagagagactctgtcctccctccc 215
Query: 426 tcccctgc 433
||||||||
Sbjct: 214 tcccctgc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_n09.g1 MSMg01no147_n09.g1 CHROMAT_FILE:
MSMg01no147_n09.g1 PHD_FILE: MSMg01no147_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:32 2005
(652 letters)
>mm_chr15_84459686_84460737
Length = 1052
Score = 1164 bits (602), Expect = 0.0
Identities = 635/646 (98%)
Strand = Plus / Plus
Query: 1 ctctgtgcagaactcaggtgacctaacacttacctaggctttgacattcccccagggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgtgcagaactcaggtgacctaacacttacctaggctttgacattcccccagggcac 260
Query: 61 agaacaggtgatggagggcaaggaggtgcagcagagatcacttcagggtacaatagggac 120
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 261 agaacaggtgatggagggcaaggaggtgcagcagagatcacttcagggtgcggtagggac 320
Query: 121 aatgtctcgctacctgatcctttgaacaccatctcctggactgacaatattcctatctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtctcgctacctgatcctttgaacaccatctcctggactgacaatattcctatctct 380
Query: 181 ctccaagctagggttcagtctaatgggctggtaccctagtctccagacccatttccagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccaagctagggttcagtctaatgggctggtaccctagtctccagacccatttccagta 440
Query: 241 gagtttgtgggaaacagaggcctcaagaagggacaggtcctagcaggacacaggtttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtttgtgggaaacagaggcctcaagaagggacaggtcctagcaggacacaggtttgga 500
Query: 301 ggacacatcttggtcagggacaaaacagtcactttggtccaacccatcggaaccatacta 360
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 501 ggacacatcttggtcagggacaaaacagtcactttggtccaatccattggaaccatacta 560
Query: 361 acacagtgcttatttgaaatgcctgcaacttgaagtctggtccaagccttgcactctcaa 420
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 acacagtgctgatttgaaatgcctgcaacttgaagtctggtccaaggcttgcactctcaa 620
Query: 421 gcagggtgatggcgacctctgctgggccagctccagagccttttccagcccaaggcatag 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagggtgatggcgacctctgctggcccagctccagagccttttccagcccaaggcatag 680
Query: 481 gaggcagctgcaagaggtctgctagaaccagatcccccaaaatggaaaaggcctgtgctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggcagctgcaagaggtctgctagaaccagatcccccaaaatggaaaaggcctgtgctt 740
Query: 541 ccacagtcacaatgttgctctcaaccattatctgtggatgctcagtgtcgggagctctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccacagtcacaatgttgctctcaaccattatctgtggatgctcagtgtcgggagctctgt 800
Query: 601 agacacccacggagtctaccctacaatgaatgggctagatcggggc 646
||||||||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 801 agacacccacggagtctcccctacactgaatgggctagattggggc 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
