Query= MSMg01no149_n02.b1 MSMg01no149_n02.b1 CHROMAT_FILE:
MSMg01no149_n02.b1 PHD_FILE: MSMg01no149_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:13 2005
(652 letters)
>mm_chr15_96541763_96542815
Length = 1053
Score = 1178 bits (609), Expect = 0.0
Identities = 639/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtatcacctcctagtaagatggagccgacgaattgcgttagctcatcttttca 64
|||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 853 gaattctgtatcacattctagtaagatggagccgacgaattgtgttagctcatcttttca 794
Query: 65 acaagaaccgctgagccccataaatcctatcacttcaggacagacaaccgtgatgagcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 acaagaaccgctgagccccataaatcctatcacttcaggacagacaaccgtgatgagcag 734
Query: 125 cgggacaacgtgtggagcaggaagtatgcctgccgttcatggtacttaatcagaaggccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cgggacaacgtgtggagcaggaagtatgcctgccgttcatggtacttaatcagaaggccc 674
Query: 185 gtggacgggtcacgaaaattctgtggtaataacttccaaaggtgccagcccacaagaaaa 244
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 673 gtggatgggtcacgaaaattctgtggtaataacttccaaaggtgccagcacacaagaaaa 614
Query: 245 gcttctaacccagccgagatcagtcaggaaaagaagctttgagaaagaaagagaagaagg 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 613 gcttctaacccagccgagatcagtcaggaaaagaagcttcgagaaagaaagagaagaagg 554
Query: 305 agcagatgtatccgcctactcatatagatacgaatctatctcatatgcatgtgcctcttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agcagatgtatccgcctactcatatagatacgaatctatctcatatgcatgtgcctcttg 494
Query: 365 gaatatttccttctggttggcatgacatcactgaccctttcaagggtgctcacttcttta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaatatttccttctggttggcatgacatcactgaccctttcaagggtgctcacttcttta 434
Query: 425 gtacgcatcaatcaatataaatttaccgaatgacaaaagtccaagagcctcgtttccctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 433 gtacgcatcaatcaatataaatttaccgaatgacaaaagtccaagagcctcgttttcctg 374
Query: 485 gattgttctccttgtgctagaagctggagttacagttattttctccctggagaaaataag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gattgttctccttgtgctagaagctggagttacagttattttctccctggagaaaataag 314
Query: 545 ttcctcggtcaggcacttcaataaacttctacataagaaaaatgtaccactgctct-aac 603
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 313 ttcctaggtcagacacttcaataaacttctacataagaaaaatgtaccactgctctgaac 254
Query: 604 gcatgacttcttcaacagctcttgttaaattgtgtggctttctatccaa 652
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcatgacttcttcaacagctcttgttaaattgtgtggctttctatccaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space: 669606
Effective search space used: 669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_n02.g1 MSMg01no149_n02.g1 CHROMAT_FILE:
MSMg01no149_n02.g1 PHD_FILE: MSMg01no149_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:13 2005
(631 letters)
>mm_chr15_96452746_96453776
Length = 1031
Score = 1154 bits (597), Expect = 0.0
Identities = 621/629 (98%)
Strand = Plus / Plus
Query: 1 ccagctcccatgttaggaggctcacaacatgttaggaggaacacctgctcctagaaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagctcccatgttaggaggctcacaacatgttaggaggaacacctgctcctagaaacct 260
Query: 61 gatgccctcttctggtctccacgggcaactgcacccacatgcacacactcccacacggat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gatgccctcttctggtctccacgggcaactgcacccacatgcatacactcccacacggat 320
Query: 121 actcttgcatacataattaaaaagaaagaaatggaagctactattaattatcactcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcttgcatacataattaaaaagaaagaaatggaagctactattaattatcactcaaca 380
Query: 181 aggtggagggagtgtttaaaagattccaataaaaagcagtatcgcccaacaccgtgaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtggagggagtgtttaaaagattccaataaaaagcagtatcgcccaacaccgtgaaca 440
Query: 241 cactgggacacgaggaagggtctacattaggggcttagcagtcactacaggaaggggaaa 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgggacacgaggcagggtctacattaggggcttagcagtcactacaggaaggggaaa 500
Query: 301 ggagctgagaatgaccacaccaaggtgcatactccagactgtcaggaatggtttctacaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagctgagaatgaccacaccgaggtgcatactccagactgtcaggaatggtttctacaa 560
Query: 361 agatgtctgcttgtggctgtgcctttatcctctgcatccctgtctccttggggccttaac 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatgtccgcttgtggctgtgcctttatcctctgcatccctgtctccttggggccttaac 620
Query: 421 aaagtgtagcacgatggcatgttaataagcagtcccccagggctgatgagatgactcagc 480
|||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 621 aaagcgtagcacgatggcatgttaataagcagtcccacaggggtgatgagatgactcagc 680
Query: 481 gggaaaaggcgcttgtcaccaaacctgaccactgagtgggatccctggaatccacctact 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cggaaaaggcgcttgtcaccaaacctgaccactgagtgggatccctggaatccacctact 740
Query: 541 ggaaagaaggaaccaactgccgaaggttctgacctttacactcttaacatgacccctccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggaaagaaggaaccaactgccgaaggttctgacctttacactcttaacatgacccctccc 800
Query: 601 tctacccccacatataagcatgcatgcat 629
|||||||||||||||||||||||||||||
Sbjct: 801 tctacccccacatataagcatgcatgcat 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
