Query= MSMg01no151_a07.b1 MSMg01no151_a07.b1 CHROMAT_FILE:
MSMg01no151_a07.b1 PHD_FILE: MSMg01no151_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:43 2005
(321 letters)
>mm_chr15_30200675_30201395
Length = 721
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 8 ttctttcttttggaatcagctcctctcaggatttttctgtagctctgggtcttcagtttc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttctttcttttggaatcagctcctctcaggatttttctgtagctctgggtcttcagtttc 370
Query: 68 atgccaactgttcagtggtgttattcatagctgccagaacttgaagtctgttacaacaac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgccaactgttcagtggtgttattcatagctgccagaacttgaagtctgttacaacaac 310
Query: 128 atggtttctattctaattctctccttccagctggtctgtcgaccacctcggatgcacctg 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtggtttctattctaattctctccttccagctggtctgtcgaccacctcggatgcacctg 250
Query: 188 cctctgtttttctccagctctctagcagagacccagacactgaaaaaatatatatataaa 247
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 249 cctctgtttttctccagctctctagcagagacccagacactgaaaaaa-atatatataaa 191
Query: 248 ttacagtcactcaagtcttagacatatgtagcatatttctgcattcgctttaaccatggt 307
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 190 ttacagtcactcaagtcttagacatatgtagcaaatttctgcattcgctttaaccatggt 131
Query: 308 aacattactctgtg 321
||||||||||||||
Sbjct: 130 aacattactctgtg 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_a07.g1 MSMg01no151_a07.g1 CHROMAT_FILE:
MSMg01no151_a07.g1 PHD_FILE: MSMg01no151_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:44 2005
(445 letters)
>mm_chr15_30075684_30076528
Length = 845
Score = 830 bits (429), Expect = 0.0
Identities = 441/447 (98%), Gaps = 5/447 (1%)
Strand = Plus / Plus
Query: 1 catttcctggtattttgttgagggtttattgtacataggtttatcaagtttatattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttcctggtattttgttgagggtttattgtacataggtttatcaagtttatattttat 260
Query: 61 ggggaaattctcatttttctttcactcatgaaagataattttaccaagcatgtcttattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaaattctcatttttctttcactcatgaaagataattttaccaagcatgtcttattg 320
Query: 121 acttgtcttttgtatctttattgttttgaatatactgttatggtttcttgactttattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttgtcttttgtatctttattgttttgaatatactgttatggtttcttgactttattaa 380
Query: 181 catgtatttgtttatttgtttatgtaggcttgtgtgtgccagggaatgagagtggcggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtatttgtttatttgtttatgtaggcttgtgtgtgccagggaatgagagtggcggtc 440
Query: 241 agaagacaactttcagaagtcagttttttttttccctctgtcataatgtttttggaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagacaactttcagaagtcagttttttttttccctctgtcataatgtttttggaataa 500
Query: 301 ccttgacttgtcaaacacaacagcttagagcctttccccacca--cccccatctctctag 358
|||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 501 ccttgacttgtcaaacacaacagcttagagcctttccccatcaggcc---atctctctag 557
Query: 359 ccaatccacatccttttcaaaaagcttccatttagaagctgatattggaattcgtttccc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccaatccacatccttttcaaaaagcttccatttagaagctgatattggaattcgtttccc 617
Query: 419 tagtccatgagggttggtatttttctc 445
|||||||||||||||||||||||||||
Sbjct: 618 tagtccatgagggttggtatttttctc 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
