Query= MSMg01no154_b05.b1 MSMg01no154_b05.b1 CHROMAT_FILE:
MSMg01no154_b05.b1 PHD_FILE: MSMg01no154_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:36 2005
(667 letters)
>mm_chr15_80972461_80973524
Length = 1064
Score = 1220 bits (631), Expect = 0.0
Identities = 654/663 (98%), Gaps = 3/663 (0%)
Strand = Plus / Plus
Query: 5 gaattctgcaagtagctggccttgcaagtcaagaggagcgctgcagggcagcccggtgca 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcaaggagttggccttgcaagtcaagaggagcgctgcagggcagcccggtgca 264
Query: 65 gagcctgacacagaagcgcagcagaaaaggagtagttctgaggcaacctcggaaagccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagcctgacacagaagcgcagcagaaaaggagtagttctgaggcaacctcggaaagccgg 324
Query: 125 agcgcaacctttcagtgtttcctgttagtcagagacatgtgaggggctaaggactctgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcgcaacctttcagtgtttcctgttagtcagagacatgtgaggggctaaggactctgca 384
Query: 185 gctttatcttggctactctgtctcctgactgtcagaatgccactttgtggttgaacatgt 244
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 385 gctttatcttggctactctgtct---gactgtcagaatgccactttgtggttgaacatgt 441
Query: 245 ctgaggacggtttaaggctcttgccatagtatcataaacacaagcataagggaactctgc 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 ctgaggacggtttaaggctcttgccatagtatcagaaacacaagcataagggaactctgc 501
Query: 305 cagatgccacgtgtactttaatggagggtctgcattctctaaagaccccaggtccgctat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cagatgccacgtgtactttaatggagggtctgcattctctaaagaccccaggtccgctat 561
Query: 365 aacatcatctatattgtgtttaagatccccttcggcttttcaagaggatcatgggacaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 562 aacatcatctatattgtgtttaagatccccttcggcttttcaagaggatcatgggacgaa 621
Query: 425 tgacctagaaggaatagctggtcccccatgattccaacatacaggggaaaggttcgcctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgacctagaaggaatagctggtcccccatgattccaacatacaggggaaaggttcgcctt 681
Query: 485 accccatgaataatgcactcacagcataaatcatcacaaaacttctttaaaatcaacaat 544
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 682 accccatgaataatgcactcacaacataaatcatcacaaaacttctttaaaatcaacaat 741
Query: 545 gcattgaactagtatccctctgggcctttgggctaccccactctagcctcctcagaactg 604
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gcattgaactactatccctctgggcctttgggctaccccactctagcctcctcagaactg 801
Query: 605 ccctgtgttttctgtgctctctgaaaaaatctgtccctccattgaaaaaaacctttatct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ccctgtgttttctgtgctctctgaaaaaatctgtccctccattgaaaaaaacctttatct 861
Query: 665 ggt 667
|||
Sbjct: 862 ggt 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1064
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1054
Effective search space: 692478
Effective search space used: 692478
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_b05.g1 MSMg01no154_b05.g1 CHROMAT_FILE:
MSMg01no154_b05.g1 PHD_FILE: MSMg01no154_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:36 2005
(249 letters)
>mm_chr15_81130525_81131175
Length = 651
Score = 449 bits (232), Expect = e-131
Identities = 245/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 1 tctcctgggctaaagtgcaaggactctgcaggacctatctgggtgcgtatgtaccgctaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 450 tctcctgggctaaagtgcaaggactctgcaagacctatctgggtgcgtatgtaccgctaa 391
Query: 61 gatctcaggctcagctctgttcaggatgaatgagtttggtgggaggcagctctataatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gatctcaggctcagctctgttcaggatgaatgagtttggtgggaggcagctctataatct 331
Query: 121 atgtaaaattgtt--ttgtttttttttttctttttgggtggcttgtttagtcccttgtac 178
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgtaaaattgttgtttttttttttttttctttttgggtggcttgtttagtcccttgtac 271
Query: 179 ctcacctatacgcagataatcatctgataattgaataaccagcagttgtcacattaatct 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctcacctatacccagataatcatctgataattgaataaccagcagttgtcacattaatct 211
Query: 239 gtagaatgga 248
||||||||||
Sbjct: 210 gtagaatgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
