Query= MSMg01no154_g20.b1 MSMg01no154_g20.b1 CHROMAT_FILE:
MSMg01no154_g20.b1 PHD_FILE: MSMg01no154_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:03 2005
(655 letters)
>mm_chr15_95780498_95781552
Length = 1055
Score = 1133 bits (586), Expect = 0.0
Identities = 630/648 (97%), Gaps = 8/648 (1%)
Strand = Plus / Minus
Query: 6 gaattcagatgcacctgcagagggagtcagatctcattacaggtggttgtgagtcaccat 65
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gaattcagatgcaccagaagagggagtcagatctcattacaggtggttgtgagtcaccat 583
Query: 66 gtggttgctgggatttgaactcaggacctttggaagagcagtcagtgctcttacccactg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 582 gtggttgctgggatttgaactcaggacctttggaagagcagtcagtgctcttatccactg 523
Query: 126 agccatctctccagaccacaagggccctttctcaaaggtctgtttacacagccatctcag 185
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 522 agccatctctccagaccacaaggaccctttctcaaaggtctatttacacagccatctcag 463
Query: 186 tgataacatgagagacataaactacagcaggtgggatttctgttagagatgaagatgaag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgataacatgagagacataaactacagcaggtgggatttctgttagagatgaagatgaag 403
Query: 246 gtcttctataactaccatttgtgcttgtgtgcatctgcgtgtgttcgggtgtgcactcaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtcttctataactaccatttgtgcttgtgtgcatctgcgtgtgttcgggtgtgcactcaa 343
Query: 306 gtgtgcaggagcatgtaaagtccaggggttgacatcacatgtcttcctcaatcttcatcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtgtgcaggagcatgtaaagtccaggggttgacatcacatgtcttcctcaatcttcatcc 283
Query: 366 tctagcttctttgaggcatggtctatccttgagcccagagctccccagttgagctatgct 425
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 282 tctagtttctttgaggcatggtctatccttgagcccagagctccccagttga-----gct 228
Query: 426 cacgcactgcccagtgagctccaggtctcctcttggttctccctcccca--gctgcaggg 483
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 227 cacgcactgcccagtgagctccagggctcctcttggttctccctccccaacactgcaggg 168
Query: 484 caggtgtttgtgggagtgcctggttttttacatgggcactgggagtccccaattccccag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 caggtgtttgtgggagtgcctggttttttacatgggcactgggagtccccaattccccag 108
Query: 544 gaagcacattacaactgagccgtctgctgagcctctctatataattattaaacacataac 603
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 107 gaagcacattacaactgagccgtctgctgagcttttctatataattattaaacacataac 48
Query: 604 aaactccccggttgggaccttttgcccagaggccttcaatttcaatgc 651
||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 47 aaactccccggtt-ggaccttttgcccagaggccttcaatttcaatgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_g20.g1 MSMg01no154_g20.g1 CHROMAT_FILE:
MSMg01no154_g20.g1 PHD_FILE: MSMg01no154_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:03 2005
(427 letters)
>mm_chr15_95640292_95641118
Length = 827
Score = 818 bits (423), Expect = 0.0
Identities = 426/427 (99%)
Strand = Plus / Plus
Query: 1 ctaagtctgtctgagtgtaggcacacagtacatctttagttaatttttattcctctggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagtctgtctgagtgtaggcacacagtacatctttagttaatttttattcctctggtg 260
Query: 61 acttcattcagtgaatactggggctcactgttcttaatgttgtagtaggaatgaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcattcagtgaatactggggctcactgttcttaatgttgtagtaggaatgaattaaa 320
Query: 121 atgaatatattcatttaccttctgcagtaaatgattctgatcgggaccattcaccagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaatatattcatttaccttctgcagtaaatgattctgatcgggaccattcaccagcaa 380
Query: 181 ccttctttgaaaccagcgagtgactgaaacccaggggaagtttgttttgtggttttgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttctttgaaaccagcgagtgactgaaacccaggggaagtttgttttgtggttttgggg 440
Query: 241 tttctcgcactttcccatattaatcctcttggagttcttcaggatttttctaacctgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctcgcactttcccatattaatcctcttggagttcttcaggatttttctaacctgggt 500
Query: 301 caatagagtgcttgaaatacttctatatttgagaactcaagtcaaagcaaacattgccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatagagtgcttgaaatacttctatatttgagaactcaagtcaaagcaaacattgccac 560
Query: 361 gggaaggcgagagcagtggagatgatgtccttggcctttgaggagaagcagagaaggggc 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 gggaaggcgagagcagtggagatgatgtccttggcctttgaggagaagccgagaaggggc 620
Query: 421 ctgtgct 427
|||||||
Sbjct: 621 ctgtgct 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
