Query= MSMg01no156_i21.b1 MSMg01no156_i21.b1 CHROMAT_FILE:
MSMg01no156_i21.b1 PHD_FILE: MSMg01no156_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:43 2005
(328 letters)
>mm_chr15_32445089_32445816
Length = 728
Score = 627 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Minus
Query: 4 ggaattccacatttgttttgatgctagatgaggactcatttcatagcacaatcttttctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ggaattccacatttgttttgatgctagatgaggactcatttcatagcacaatcttttctc 468
Query: 64 tccttcctaggcatcctggaaggagaatgcctatcttggagtcttattaataaagagaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tccttcctaggcatcctggaaggagaatgcctatcttggagtcttattaataaagagaac 408
Query: 124 tcacagagacatgattttttagagtattgtgtgatttttaactatctctagagggctgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tcacagagacatgattttttagagtattgtgtgatttttaactatctctagagggctgtg 348
Query: 184 actccacagatttttaaatgtctctatcattataatgatgtaatgcttggctgaataaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 actccacagatttttaaatgtctctatcattataatgatgtaatgcttggctgaataaac 288
Query: 244 tatcattgtctagtgtagagttatattaaaatagaaatgtttatcaggtcacttagaata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tatcattgtctagtgtagagttatattaaaatagaaatgtttatcaggtcacttagaata 228
Query: 304 gtataataaaatattgttttcttt 327
||||||||||||||||||||||||
Sbjct: 227 gtataataaaatattgttttcttt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_i21.g1 MSMg01no156_i21.g1 CHROMAT_FILE:
MSMg01no156_i21.g1 PHD_FILE: MSMg01no156_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:43 2005
(286 letters)
>mm_chr15_32295766_32296451
Length = 686
Score = 426 bits (220), Expect = e-123
Identities = 266/288 (92%), Gaps = 14/288 (4%)
Strand = Plus / Plus
Query: 1 tagaagtgtgtgtctccctgtctcagctacatggaaacagacatgcacaaatc--acaag 58
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 211 tagaagtgtgtgtctccctgtctcagctacatggaaacagacatgcacaaatcggtcaa- 269
Query: 59 tgttgaaggttactacggtcggtcaaggtgaagatagggaggtcattggtaatcgtgaac 118
| || | || |||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 270 -gctgca------ta----cggtcaaggtgaagatggggaggtcattggtaatggtgaac 318
Query: 119 tcatggaggaaaacatgaggggatatatggtctctggtgcaagtgagcccaggagggatg 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcatggaggaaaacatgaggggatatatggtctctggtgcaagtgagcccaggagggata 378
Query: 179 agaaaagttgaaggaaatggaacttgtatcccctggccagggtttgggtaatgacttctc 238
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 379 agaaaagttgaaggaaatggaacttgtatcccctggccaggttttgggtaatgacttctc 438
Query: 239 cattgtcaatgagacacagaaaatgaatcccctttggtttttcttcat 286
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 cattgtcaatgagacacagaaaatgaatcccctttggtttctcttcat 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
