Query= MSMg01no161_c23.b1 MSMg01no161_c23.b1 CHROMAT_FILE:
MSMg01no161_c23.b1 PHD_FILE: MSMg01no161_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:30 2005
(349 letters)
>mm_chr15_29455523_29456271
Length = 749
Score = 511 bits (264), Expect = e-149
Identities = 336/378 (88%), Gaps = 31/378 (8%)
Strand = Plus / Plus
Query: 1 gaatcacagacctctagaatagtcttgttttcctgattattttcaagtaaaacacaatgc 60
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 172 gaatcacagacctctaggatagtcttgttttcctgattaatttcaagtaaaacacaatgc 231
Query: 61 atgctagttaggtataatttatgctatacagtgtttaaatatactagaaattcacattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atgctagttaggtataatttatgctatacagtgtttaaatatactagaaattcacattgt 291
Query: 121 gccacata----catgcatacatacata-------------------------catacat 151
|||||||| |||||||||||||||| |||||||
Sbjct: 292 gccacatacatgcatgcatacatacatacatacatacatacattacatacatgcatacat 351
Query: 152 atatacagctactatcagtcaaacataatactaagtttttggttttttctttaagcaaat 211
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 352 atatacagctactatcagtcaaatataatactaagtttttggttttttctttaagcaaac 411
Query: 212 gtaccaaggggaagcagcattaaccaacacaac-gttcacactcaaatactgtcaatttt 270
||||||||||||||||||| || |||||||| | |||||||||||| | |||||||||||
Sbjct: 412 gtaccaaggggaagcagcagtacccaacaca-ctgttcacactcaacttctgtcaatttt 470
Query: 271 ataattttcaaactctaagttcatactcttttttttgtgagtgtctttctgtacaatttt 330
|||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 471 ataattttcaaactctaagttcatactcatttgtctgtgagtgtctttctgtacaatttt 530
Query: 331 atgcatatgcatagtcta 348
||||||||||||||||||
Sbjct: 531 atgcatatgcatagtcta 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_c23.g1 MSMg01no161_c23.g1 CHROMAT_FILE:
MSMg01no161_c23.g1 PHD_FILE: MSMg01no161_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:30 2005
(392 letters)
>mm_chr15_29538251_29539042
Length = 792
Score = 719 bits (372), Expect = 0.0
Identities = 387/392 (98%)
Strand = Plus / Minus
Query: 1 agcatttaatacaaaataaaatggaagtagctcatctttaacaacaacggctgattctta 60
|||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 592 agcatttaatacaatataagatggaagtagctcatctttaacaacaatggctgattctta 533
Query: 61 ttctaagatgtgtgggctgatggtccaaagtgcaattttgagccaacattggtcgctcct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 532 ttctaagatgtgtgggctgatggtccaaagtgcaattttgagccaacattggtcactcct 473
Query: 121 cccatgaagaaacagctaacatttttatatgttaataattcatataatcatgagaggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cccatgaagaaacagctaacatttttatatgttaataattcatataatcatgagaggaga 413
Query: 181 acaaaagcagaaacttccggtgggcagggaaatgttaagtggtagagacaaagaatatgg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 412 acaaaagcagaaacttccggtgggcaaggaaatgttaagtggtagagacaaagaatatgg 353
Query: 241 tagcttttcagtaacagaattatctcctctgcacatatttgagtaaggagctgtaatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tagcttttcagtaacagaattatctcctctgcacatatttgagtaaggagctgtaatagt 293
Query: 301 gtgtatgttctatttcataaaaagacttgccattggctggcatatagaagaaaataatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtgtatgttctatttcataaaaagacttgccattggctggcatatagaagaaaataatga 233
Query: 361 tctattctcatttctaacaagtggatgcagaa 392
||||||||||||||||||||||||||||||||
Sbjct: 232 tctattctcatttctaacaagtggatgcagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
