TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAATTTCCTACTTAATGATACATTTCTCATGAAAATGTGCAAACAG
TTACAGAGGGTTTGGAAGAATTCATTACAGTCCATTATTGAATTTGCAGT
GCGGATACAAGCACTTTTGGCTGAGGGCTGAGATGGAAAGATCTATTGAA
CAAGTTTGTGCCAGAGACCCTATATTGAAAGTTTATAAATATAATTTCAT
TGCTACATAGCATGTTATGACATGAGAGTTTTTCAGTACCACATATTTGG
GGCAATTTCTTCTTTGTTATCTTGCATACATGAGCTACTTTTGATAGCAT
GCAAAATGTTTGAATCACAAAATCATTAGTGAGAAGTAAGAGTGCAGGTC
TGCATGTTTTCCTTATTTTTTTCCAAGTTTGCATTAAGCTTTGCTGAAAA
ATTCACTTTATTCGCTGCATGACATTTATGCTGAATTCAGCTATGAGTAA
TGTAACAGAGGGGTGTGGACTCTGACAGGAGAATTTGCATTTACTCTCCT
TTTCTAAAGAAAAGTAATGAAGCAGGAAATAGTCACAAATAACAAGAAGC
ATTGAAACACAACAATCTCCACTATCCTATAAATGAGAGAAGGTGGCAGA
AGAAATCACAGCTTTGCACTCACCTATGACTGCAAAGCAGTCTCCTTCAT
CNGTTTTCATTCTTATGACCTTCAAATGTCAAACATTCCTC

ATGAAGATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGCCAAAGA
AGCACCTGAAAAAATTGTTCAACATCCTTAATCATCAGGAAAATGCAAAT
CAAAACAACCCTGAAATTCCACCTCACACCAGTCAAAAGGGTTAAAATCA
AAAATTCAGGTGACAGCAAATGCTGGCGAGAATGTGAAAAAAAAGAAACA
CTCCTCCATTGTTGGGGGAATTGCAGGCCTGTACAACCACTCTGGAAATC
CGTCTGGCGGTTCCTCAAAAAATTGGACATAGTACTACCGAAGGATTCAG
CAAAACTTTTTTTGGGCACACACCCACAAAATGCCCCAATTGGTAAAAAG
GATACATGCTCCACTATCTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAAATGCCCGTCAACAGAAAAATGGATTCAAAAAATGT
GGTACATCTACCCAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCAACATCCTGAGTGA
GGTAACACATTCCCAAAGGAACTCACACAATATGTACTCACTGATAAGTG
AATATTAGCCCAAAACTAGGATACCCAAGATATAAGATACAATTTGTTAA
ACCCTGAAACCTCAGAAAAATGAAAACTGAAGTGTGGACC

Query= MSMg01no163_j02.b1 MSMg01no163_j02.b1 CHROMAT_FILE:
MSMg01no163_j02.b1 PHD_FILE: MSMg01no163_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:11 2005
         (683 letters)



>mm_chr15_21977823_21978905
          Length = 1083

 Score = 1261 bits (652), Expect = 0.0
 Identities = 673/680 (98%), Gaps = 2/680 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaatttcctacttaatgatacatttctcatgaaaatgtgcaaacagttacagag 64
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 883 gaattccaatttcctacttaatgataaatttctcatgaaaatgtgcaaacagttacagag 824

                                                                       
Query: 65  ggtttggaagaattcattacagtccattattgaatttgcagtgcggatacaagcactttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ggtttggaagaattcattacagtccattattgaatttgcagtgcggatacaagcactttt 764

                                                                       
Query: 125 ggctgagggctgagatggaaagatctattgaacaagtttgtgccagagaccctatattga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ggctgagggctgagatggaaagatctattgaacaagtttgtgccagagaccctatattga 704

                                                                       
Query: 185 aagtttataaatataatttcattgctacatagcatgttatgacatgagagtttttcagta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aagtttataaatataatttcattgctacatagcatgttatgacatgagagtttttcagta 644

                                                                       
Query: 245 ccacatatttggggcaatttcttctttgttatcttgcatacatgagctacttttgatagc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ccacatatttggggcaatttcttctttgttatcttgcatacatgagctacttttgatagc 584

                                                                       
Query: 305 atgcaaaatgtttgaatcacaaaatcattagtgagaagtaagagtgcaggtctgcatgtt 364
           |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 583 atgcaaaatgtttgaatcacgaaatcatgagtgagaagtaagagtgcaggtctgcatgtt 524

                                                                       
Query: 365 ttccttatttttttccaagtttgcattaagctttgctgaaaaattcactttattcgctgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttccttatttttttccaagtttgcattaagctttgctgaaaaattcactttattcgctgc 464

                                                                       
Query: 425 atgacatttatgctgaattcagctatgagtaatgtaacagaggggtgtggactctgacag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atgacatttatgctgaattcagctatgagtaatgtaacagaggggtgtggactctgacag 404

                                                                       
Query: 485 gagaatttgcatttactctccttttctaaagaaaagtaatgaagcaggaaatagtcacaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gagaatttgcatttactctccttttctaaagaaaagtaatgaagcaggaaatagtcacaa 344

                                                                       
Query: 545 ataacaagaagcattgaaacacaacaatctccactatcctataaatgagagaaggtggca 604
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 343 ataacaagaagcattgaaacacaacaatctccattatcctataaatgagagaaggtggca 284

                                                                       
Query: 605 gaagaaatcacagctttgcactcacctatgactgcaaagcagtctccttcatcngtttt- 663
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 283 gaagaaatcacagccttgcactcacctatgactgcaaagcagtctccttcatc-gttttt 225

                               
Query: 664 cattcttatgaccttcaaat 683
           ||||||||||||||||||||
Sbjct: 224 cattcttatgaccttcaaat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)