Query= MSMg01no164_d12.b1 MSMg01no164_d12.b1 CHROMAT_FILE:
MSMg01no164_d12.b1 PHD_FILE: MSMg01no164_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:00 2005
(315 letters)
>mm_chr15_23840970_23841684
Length = 715
Score = 571 bits (295), Expect = e-167
Identities = 306/311 (98%), Gaps = 3/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaatgcacatacctaaacataataaaagtgatatagaacaaaccaacagccagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcaatgcacatacctaaacataataaaagtgatatagaacaaaccaacagccagc 266
Query: 64 agcaaattaaatggagagaaacttgaagcaatcctaccattaccaggaataacaacagtt 123
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 267 agcaaattaaatggagagaaacttgaagcaatcccaccattaccaggaataacaacagct 326
Query: 124 tttttttttttttttagtttttaagtttttcatttgattcataaatcttattaggtagta 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tttttttttttt---agtttttaagtttttcatttgattcataaatcttattaggtagta 383
Query: 184 agtatttacactcactgttaagaggatcatgatttatctttaagctctgtgtatgtagaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtatttacactcactgttaagaggatcatgatttatctttaagctctgtgtatgtagaa 443
Query: 244 attgatactttggttcttagcatccactctggacctcagaagtctatgcagctccattta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attgatactttggttcttagcatccactctggacctcagaagtctatgcagctccattta 503
Query: 304 tagggattctc 314
|||||||||||
Sbjct: 504 tagggattctc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_d12.g1 MSMg01no164_d12.g1 CHROMAT_FILE:
MSMg01no164_d12.g1 PHD_FILE: MSMg01no164_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:00 2005
(242 letters)
>mm_chr15_24022515_24023156
Length = 642
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Minus
Query: 1 atgaccatatatacctctactctcagaggggcagagcaataggagaattttgcttaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atgaccatatatacctctactctcagaggggcagagcaataggagaattttgcttaggct 343
Query: 61 atttgttgtattccttacacgtatctctaaccagttgatcagtgtttagctgttgctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atttgttgtattccttacacgtatctctaaccagttgatcagtgtttagctgttgctttt 283
Query: 121 ggaaaagttagaaccacatttcagactacatttcttcagacctggagggaactgtgttta 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 282 ggaaaagttagaaccacatttcagactgcatttcttcagacctggagggaactgtgttta 223
Query: 181 tgataaactgatgaacagttcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tgataaactgatgaacagttcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
