Query= MSMg01no166_e23.b1 MSMg01no166_e23.b1 CHROMAT_FILE:
MSMg01no166_e23.b1 PHD_FILE: MSMg01no166_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:46 2005
(325 letters)
>mm_chr15_37087765_37088489
Length = 725
Score = 582 bits (301), Expect = e-171
Identities = 316/321 (98%)
Strand = Plus / Minus
Query: 5 ggaattcactctgtatacccggctgaccttgaactaagagatctacctgcttctacctct 64
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaattcactctgtagaccaggctgaccttgaactaagagatctacctgcttctacctct 566
Query: 65 tgagtgctggtattaaaggcatgtgccaccatacctggctcaatttttactagttttctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagtgctggtattaaaggcatgtgccaccatacctggctcaatttttactagttttctg 506
Query: 125 gaaagataagtagaaagattcctttatatgtgattattgtgttcctttaaactttgtttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaagataagtagaaagattcctttatatgtgattattgtgttcctttaaactttgtttt 446
Query: 185 aaagtaagaatattgaccatacatatttatagaacacagtgacagtgtgctcctctggtg 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagtaagaatactgaccatacatatttatagaacacagtgacagtgtgctcctctggtg 386
Query: 245 tataatgagaaaccaaatattctctccaattctgtaatctgtctttttcccttctgtgtt 304
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 385 tataatgagaaaccaaatattctctccgattctgtaaactgtctttttcccttctgtgtt 326
Query: 305 tattttttcttttgatgtgtt 325
|||||||||||||||||||||
Sbjct: 325 tattttttcttttgatgtgtt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_e23.g1 MSMg01no166_e23.g1 CHROMAT_FILE:
MSMg01no166_e23.g1 PHD_FILE: MSMg01no166_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:46 2005
(298 letters)
>mm_chr15_36947730_36948426
Length = 697
Score = 501 bits (259), Expect = e-146
Identities = 288/303 (95%), Gaps = 11/303 (3%)
Strand = Plus / Plus
Query: 1 agctttacctaatcccagaactgaaattcaaacccctaagccatgctgtggtgggattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctttacctaatcccagaactgaaattcaaacccctaagccatgctgtggtgggattga 260
Query: 61 aagcttcatttcctaagccatcagagtgcatcgttgctgatgctgcgtgttgtatgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 aagcttcatttcctaagccatcagagtgcatcgttgctgatgctgtgtgttgtatgtgtt 320
Query: 121 acacttaagagtagccagtgctggaaaccaaatttgttccctggctacttctctgggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacttaagagtagccagtgctggaaaccaaatttgttccctggctacttctctgggtta 380
Query: 181 cacagggaaatgtttgtttcttgtttctcaacctgaagagtgagagattttggagtattc 240
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 381 cacagggaaatatttgtttcttgtttctcaacctgaagagtgagagattt-ggagtactc 439
Query: 241 cttttgtgtt-----ttttttttgaattcttgagatacaattataaatttgctctgatat 295
|||||||| | ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttttgtgctaacacttt-----gaattcttgagatacaattataaatttgctctgatat 494
Query: 296 att 298
|||
Sbjct: 495 att 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 697
Length adjustment: 9
Effective length of query: 289
Effective length of database: 688
Effective search space: 198832
Effective search space used: 198832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
