Query= MSMg01no173_a12.b1 MSMg01no173_a12.b1 CHROMAT_FILE:
MSMg01no173_a12.b1 PHD_FILE: MSMg01no173_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:37 2005
(319 letters)
>mm_chr15_65963453_65964171
Length = 719
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%)
Strand = Plus / Minus
Query: 4 ggaattccatcccaaaatgattttggataataagtcctatacatggccattggtatatct 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 517 ggaattccatcccaaaatgattttggataataagtcctttacatggccattggtatatct 458
Query: 64 taagatataatgtcccttggagggctcccctatgattctgcttaaatgcatgttaggaga 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taagatataatgtcctttggagggctcccctatgattctgcttaaatgcatgttaggaga 398
Query: 124 actagatccctaagtaattttggaaaccacagctgctttctacttgcctgtggatcctgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 actagatccctaagtaattttggaaaccacagctgctttctacttgcctgtggatcctgc 338
Query: 184 tacaggtataaggtcacagtgtccagtagtgatgtttcctgagtttgggatatcctagta 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 337 tacaggtataaggtcacagtgtccagtagtgatgtttcctgagtttgggataccctagta 278
Query: 244 ccatcccagacctctgagagtctcttaatggacttctcaattgagtacctgtttttcaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ccatcccagacctctgagagtctcttaatggacttctcaattgagtacctgtttttcaaa 218
Query: 304 tgtgacactttcta 317
||||||||||||||
Sbjct: 217 tgtgacactttcta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_a12.g1 MSMg01no173_a12.g1 CHROMAT_FILE:
MSMg01no173_a12.g1 PHD_FILE: MSMg01no173_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:37 2005
(294 letters)
>mm_chr15_65789259_65789953
Length = 695
Score = 451 bits (233), Expect = e-131
Identities = 281/297 (94%), Gaps = 5/297 (1%)
Strand = Plus / Plus
Query: 1 tctaaatgaccatctagggtgtagtgatttctcca-aggtgttgtgacaaattcccacac 59
|||||||||||||||| || ||||||||||||||| | ||||||||||||||||| ||||
Sbjct: 201 tctaaatgaccatctaagg-gtagtgatttctccata-gtgttgtgacaaattcctacac 258
Query: 60 acttagaga-a-aaaaacacgagaagttgataatctcatgattttagggatcaaaagcct 117
||||||||| | ||||||| ||||||||||||||||||||||||||| || ||||| |||
Sbjct: 259 acttagagagagaaaaacatgagaagttgataatctcatgattttagagaccaaaatcct 318
Query: 118 gggaaggtgggtatacagaattctgtgttgttttaataagtgcctcaagttacgtctatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gggaaggtgggtatacagaattctgtgttgttttaataagtgcctcaagttacgtctatt 378
Query: 178 tgtacatctagtgcagctttaggggatgctactcacatagcctttgatgttgagttggca 237
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379 tttacatctagtgcagctttaggggatgctactcacatagcctttgacgttgagttggca 438
Query: 238 ttctctagctctttgctctgcacaccactcattgtctatgtgttttctttattgctt 294
|||||||||||||||||||||||| || ||||||||||||||||||| |||||||||
Sbjct: 439 ttctctagctctttgctctgcacaacattcattgtctatgtgttttcattattgctt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 695
Length adjustment: 9
Effective length of query: 285
Effective length of database: 686
Effective search space: 195510
Effective search space used: 195510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
