Query= MSMg01no174_j14.b1 MSMg01no174_j14.b1 CHROMAT_FILE:
MSMg01no174_j14.b1 PHD_FILE: MSMg01no174_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:30 2005
(318 letters)
>mm_chr15_27180562_27181279
Length = 718
Score = 609 bits (315), Expect = e-179
Identities = 315/315 (100%)
Strand = Plus / Plus
Query: 4 ggaattcttttgtttactgcacccacatttaaactacaccttaaactatctgagaatata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttgtttactgcacccacatttaaactacaccttaaactatctgagaatata 263
Query: 64 ctagcaggatacagacagaaaggacctttttcttggaagaacagcagaaaatgcaatatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctagcaggatacagacagaaaggacctttttcttggaagaacagcagaaaatgcaatatt 323
Query: 124 gaaatcataaaataatattcagtaaagggaaaccccatttttcaaaacatctatgtgact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaatcataaaataatattcagtaaagggaaaccccatttttcaaaacatctatgtgact 383
Query: 184 tgcaatcaaacaaaaaaatctaatacagactcggttcccagtttgaattacaaaataaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcaatcaaacaaaaaaatctaatacagactcggttcccagtttgaattacaaaataaat 443
Query: 244 ccccagaagtggtttctcccatgcaagagcttctaggcatgccatttctgtcctctgctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccccagaagtggtttctcccatgcaagagcttctaggcatgccatttctgtcctctgctc 503
Query: 304 atatctggtttctga 318
|||||||||||||||
Sbjct: 504 atatctggtttctga 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_j14.g1 MSMg01no174_j14.g1 CHROMAT_FILE:
MSMg01no174_j14.g1 PHD_FILE: MSMg01no174_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:30 2005
(287 letters)
>mm_chr15_27277486_27278173
Length = 688
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 atcattggaagtggtggtacaagaatttgtgagctgtcttatgtggatactaggaatcaa 60
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 604 atcattggaagtggtggtacaagaatttgtgagctgtctcatgtggatgctaggaatcaa 545
Query: 61 acataggttctctacaagagcagtgtgctattaactgcagagccatttctctggtctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acataggttctctacaagagcagtgtgctattaactgcagagccatttctctggtctaat 485
Query: 121 gcaggtattgagcaaatgttggaaatatggtggca-gggtcatttggtctaagattgtca 179
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 484 gcaggtattgagcaaatgttggcaatatggtggcaagggtcatttggtctaagattgtca 425
Query: 180 gggcttctgagcatgcccagagattcctacttggtattcacctttggtgaagcatggcat 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gggcttctgagcgtgcccagagattcctacttggtattcacctttggtgaagcatggcat 365
Query: 240 ctggaacataagcaagtcacatgacattcaaggatggtgatggccata 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctggaacataagcaagtcacatgacattcaaggatggtgatggccata 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
