Query= MSMg01no178_m16.b1 MSMg01no178_m16.b1 CHROMAT_FILE:
MSMg01no178_m16.b1 PHD_FILE: MSMg01no178_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:39 2005
(597 letters)
>mm_chr15_85611088_85612084
Length = 997
Score = 1065 bits (551), Expect = 0.0
Identities = 581/593 (97%), Gaps = 4/593 (0%)
Strand = Plus / Plus
Query: 5 gaattctttactgactctttaagatttccatgtgagggctggagagatggctcagcggtt 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattctttacagattctttaagatttccatgtgagggctggagagatggctcagcggtt 268
Query: 65 aagagcactgcctgctcttcaagaggtcctgagttcaattcccagcaaccacatggtggc 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 269 aagagcactgcctgctcttcaagaggtcctgagttcagttcccagcaaccacatggtggc 328
Query: 125 tcacaaccatctgtaatgggatccaatgccctcttctgatgtgtctgaagacagtgatac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcacaaccatctgtaatgggatccaatgccctcttctgatgtgtctgaagacagtgatac 388
Query: 185 aataaataaataaataaataaataaataaataaataaataaataaataagtctttctaaa 244
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 389 aataaataaataaataaataaataaataaataaataaataaataa----gtctttctaaa 444
Query: 245 aaagatttccatgtgaataatgacgtcatgtgccacaaagacagtttcccttcttccatt 304
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 445 aaagatttccatgtgaataatgatgtcatatgccacaaagacagtttcccttcttccatt 504
Query: 305 tcaagatgggcctttttagtttcctttattacattgttatactggtcagaatttccagca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcaagatgggcctttttagtttcctttattacattgttatactggtcagaatttccagca 564
Query: 365 caatgttacacaggaatggcaatgcctcctcttattactgatccatggaaaagccacaca 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caatgttagacaggaatggcaatgcctcctcttattactgatccatggaaaagccacaca 624
Query: 425 atctttgccacagaatgttctggctacagtttctcatagacgcccctccaacagtgttct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atctttgccacagaatgttctggctacagtttctcatagacgcccctccaacagtgttct 684
Query: 485 tatggggtgcttagatacttaccggactgatggggttaccttcatgtcccagtgtgctat 544
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatagggtgcttagatacttaccggactgatggggttaccttcatgtcccagtgtgctat 744
Query: 545 tcttattaggcatcgatgctagatatggggaaatctttatgatgattaaaagg 597
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 745 tcttattaggcatcgatgttagatatggggaaatctttatgatgattaaaagg 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_m16.g1 MSMg01no178_m16.g1 CHROMAT_FILE:
MSMg01no178_m16.g1 PHD_FILE: MSMg01no178_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:39 2005
(243 letters)
>mm_chr15_85763121_85763763
Length = 643
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 actgtttagaccaggctggcctcaaacttatgaagatctgcctctgtctctgagtgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 actgtttagaccaggctggcctcaaacttatgaagatctgcctctgtctctgagtgctgg 440
Query: 61 gactaaaagcatgcaccatggtgcctggccttaactgcattcatttaaaattctgttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gactaaaagcatgcaccatggtgcctggccttaactgcattcatttaaaattctgttata 380
Query: 121 ggctaagtgcaatactctagatttacatgtatgttgttaaacaagattaggtcttcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggctaagtgcaatactctagatttacatgtatgttgttaaacaagattaggtcttcacaa 320
Query: 181 actggtattgtatttaattcccaacccctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 actggtattgtatttaattcccaacccctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 260
Query: 241 tgt 243
|||
Sbjct: 259 tgt 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 9
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
