Query= MSMg01no178_n22.b1 MSMg01no178_n22.b1 CHROMAT_FILE:
MSMg01no178_n22.b1 PHD_FILE: MSMg01no178_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:45 2005
(642 letters)
>mm_chr15_71148223_71149264
Length = 1042
Score = 1106 bits (572), Expect = 0.0
Identities = 623/640 (97%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttctctctaccatgtagctgtatatccactatgtgtctgatctcatgccagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttctctctaccatgtagctgtatatccactatgtgtctgatctcatgccagt 263
Query: 64 ttgactggcataactttgcctatttcttctccattctcctccactgggcagcaactgaac 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgactggcataattttgcctatttcttctccattctcctccactgggcagcaactgaac 323
Query: 124 tttatagcatgcctatcctagggattttctgttggaccctaattaaattatccctgagct 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttatagcatgcctaccctagggattttctgttggaccctaattaaattatccctgagct 383
Query: 184 tcaatttgagtccactctggaacttttttttatgactaacaccaagaatgggaccctgat 243
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 tcaatttgagtccactctggaacttttttt-atgactaacaccaagaatgggaccctgat 442
Query: 244 tacccc-agatcaataactacccaattatatgtgttgactgaacacctgatttaattaat 302
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcccccagatcaataactacccaattatatgtgttgactgaacacctgatttaattaat 502
Query: 303 tgagaggctacattcatgtgctcactccctggtaggatccatgcaaggttagtgcatatc 362
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgagaggctacagccatgtgctcactccctggtaggatccatgcaaggttagtgcatatc 562
Query: 363 ttctttcattcaatggtttccttccatgtaatgtttaacttgaaaatgaataagtcatca 422
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 ttctttcattcaatggtttccttccaagtaatgtttaacttgaaaatgaataagtcatca 622
Query: 423 gctcctatgatagaaactaatacctttcttcaaacatgtccattaaaggacttatgtata 482
| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 623 gttcctatgatagaaactaatatctttcttcagacatgtccattaaaggacttatgtatc 682
Query: 483 tttttaaaagatgttttaaattgaaatagaattatatcacttctccctcacttcagtttc 542
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 683 tttttaaaagatgttttaaattgaaatagaattatatcacttctctctcacttcagtttc 742
Query: 543 tcccgtgccttcccactctcaagttgacagcactgatagcctcttttcctttgactaata 602
| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 743 ttccgtgctttcccactctcaagttgacagcactgatagcctcttttcctctgactaata 802
Query: 603 tgttacatacttgtatatatgtgtgtgtgtggatgcacaa 642
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 803 tgttacatacttgtatatatgtgtgtgtatggatgcacaa 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_n22.g1 MSMg01no178_n22.g1 CHROMAT_FILE:
MSMg01no178_n22.g1 PHD_FILE: MSMg01no178_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:45 2005
(287 letters)
>mm_chr15_71260320_71261006
Length = 687
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%)
Strand = Plus / Minus
Query: 1 agatataagaagagatgggaggacaagatgagatgtatttgtcttcctcgtctctgcttt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 487 agatataagaagagatgggaggacaagatgagatgcatttgtcttcctcgtctctgcttt 428
Query: 61 gtgactctaccagcaatgatgttcctactgaatgagtctcttaactttggaacttcaaaa 120
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 427 gtgactctaccagcaatgatgatcctactgaatgcgtctcttaactttggaacttcaaaa 368
Query: 121 ttatgagctggaagaaaattttcttttataaattagtcctggttcaaatattttgttaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 367 ttatgagctggaagaaaattttcttttataaattagtcctggttcaaatattttgttaca 308
Query: 181 acacagagggtctatgaatggccacaaacttgagccaaccatttctgtaacaatctgata 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 307 acacagagggtctatgaatggccacaaacttgagccaaacatttctgtaacaatctgata 248
Query: 241 tagcagagagattttcctagcaataaaataataatctaccacagatt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tagcagagagattttcctagcaataaaataataatctaccacagatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
