Query= MSMg01no181_m22.b1 MSMg01no181_m22.b1 CHROMAT_FILE:
MSMg01no181_m22.b1 PHD_FILE: MSMg01no181_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:22 2005
(697 letters)
>mm_chr15_69459570_69460666
Length = 1097
Score = 1129 bits (584), Expect = 0.0
Identities = 597/602 (99%), Gaps = 2/602 (0%)
Strand = Plus / Minus
Query: 98 ctgtctaaactcaccaaacttccaatggtaggagcaatgtgtacttaaccaaagtaatga 157
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 ctgtctaaacttaccaaacttccaatggtaggagcaatgtgtacttaaccaaagtaatga 1038
Query: 158 agaat--acacacacacacacacacacacacacacacacacacacacacacacacacaca 215
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 agaatacacacacacacacacacacacacacacacacacacacacacacacacacacaca 978
Query: 216 catacacatatggagagaaaaagagacagacagacaggcagggagagacacaaaaagaga 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 catacacatatggagagaaaaagagacagacagacaggcagggagagacacaaaaagaga 918
Query: 276 tacagagacaaagacagagagaaattgttccttctgttggtattgccaattatagaaata 335
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 917 tacagagacaaagacagagagaaattggtccttctgttggtattgccaattatagaaata 858
Query: 336 cagagcctggttttgtttctatttcaataaattacaggaaaacaattgtctggatacaaa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 cagagcctggttttgtttctatttcaataaattacaggaaaacaattgtctggatacaaa 798
Query: 396 aaaaaagaaattttagaagaaaaaattctaaggacaatcttttcataaaacctataagtc 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaaaaagaaattttagaagaaaaaattctaaggacaatcttttcataaaacctataagtc 738
Query: 456 ttaggaatttcttaaatgtgtagacaattaagaaagaaagttaaaagaatttatctgtca 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttaggaatttcttaaatgtgtagacaattaagaaagaaagttaaaagaatttatctgtca 678
Query: 516 atgcttgctttctcgagaatcatgggatatggtcagtgcattaagtaacatggagacagg 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atgcttgctttctcgagaatcatgggatatggtcagtgcattaagtaacatggagacagg 618
Query: 576 aagaggtaacacataacaaacaggagcacataagcagctcaaaatgctgcaataaagtat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aagaggtaacacataacaaacaggagcacataagcagctcaaaatgctgcaataaagtat 558
Query: 636 aagatgctaatgcagaagaatgcgtgaggatttgagaatgaatttagtccattttaagag 695
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 557 aagatgctaatgcagaagaatgggtgaggatttgagaatgaatttagtccattttaagag 498
Query: 696 gt 697
||
Sbjct: 497 gt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_m22.g1 MSMg01no181_m22.g1 CHROMAT_FILE:
MSMg01no181_m22.g1 PHD_FILE: MSMg01no181_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:22 2005
(292 letters)
>mm_chr15_69263957_69264648
Length = 692
Score = 513 bits (265), Expect = e-150
Identities = 281/289 (97%), Gaps = 5/289 (1%)
Strand = Plus / Plus
Query: 1 tattccatgtgtggctttttataggtgtgttgtggagatctgaacataagccttttcctg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatttcatgtgtggctttttataggtgtgttgtggagatctgaacataagccttttcctg 260
Query: 61 accaagccatctctctacttctgggcatttgctgttacactgagaatgtctttatacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaagccatctctctacttctgggcatttgctgttacactgagaatgtctttatacttc 320
Query: 121 atctgtgacctcagcctgcttcctgagcctctgaatgcttgttggccacacttacctcca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 atctgtgacctcagcctgcttcctgagcctctgaatgcttgttggccacacttaccacca 380
Query: 181 agctttggttttgttgttgttttgttttgttttttttttttgtttttggtgccgaatcca 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 agctttggttttgttgttgttttgttttgttttttt-----gtttttggtgccgaatcca 435
Query: 241 cagagatttctttgtttgactctattcaaaaatttccttatccatgttt 289
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagagatttcattgtttgactctattcaaaaatttccttatccatgttt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|