Query= MSMg01no183_b03.b1 MSMg01no183_b03.b1 CHROMAT_FILE:
MSMg01no183_b03.b1 PHD_FILE: MSMg01no183_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:59 2005
(658 letters)
>mm_chr15_91763760_91764824
Length = 1065
Score = 1152 bits (596), Expect = 0.0
Identities = 643/662 (97%), Gaps = 7/662 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagtgagaaacgcttcaaaatatttgcaaacgctacatatcctgacatcaatgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ggaattcagtgagaaacgcttcaaaatatttgcaaacgctacatatcctgacatcaatgc 806
Query: 64 ttacattctaatggcttccctaaatggcttaactctgctcttcttctagatcttgaatcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttacattctaatggcttccctaaatggcttaactctgctcttcttctagatcttgaatcc 746
Query: 124 cttccagctacaaaaaaattctgatgcagatcagtgacaaccggcacttgaaaacgagat 183
|||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||
Sbjct: 745 cttccagctacaaaaaaattctgatgcacatcagcgacaaccagcacttgaaaacgagat 686
Query: 184 tagaagaaagagctgtagctgcataatgggaacattagggtgcaaaaatgtaaataaggg 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagaagaaagagctgtagttgcataatgggaacattagggtgcaaaaatgtaaataaggg 626
Query: 244 atttttaaatcaataccaagttataattattctcatgacattaatctcatgtaaactttt 303
||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||
Sbjct: 625 attttaaaatcaataccaagttataattattttcacgacattaatctcatgtaaactctt 566
Query: 304 atattaaaaat---atagtgccattctaaaattcaactttaaaatgatttgagtaatgcc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atattaaaaatcatatagtgccattctaaaattcaactttaaaatgatttgagtaatgcc 506
Query: 361 attcctttattgtcatagcaggataagcatctttagaaaatggcctaagaataacctaag 420
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 attcctttattgtcatggcaggataagcatctttagaagatggcctaagaataacctaag 446
Query: 421 gctaaaatgcttacttctagcccttggatcttaggatttttttttt----cactgtgtcc 476
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 gctaaaatgcttacttctagcccttggatcttaggattttttttttttttcactgtgtcc 386
Query: 477 taaccaggcagttcatgcatgacaaactgagttaatgcagagtacacattcacagggtaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaccaggcagttcatgcatgacaaactgagttaatgcagagtacacattcacagggtaa 326
Query: 537 ctcacttgacgctccttttgcactctcctatacatcttgccatctcaactctcttcctac 596
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 325 ctcacttgacgctccttttgcactctcctatacatcttgccatctcgactctcttcctac 266
Query: 597 aaccattgtacttgacggtcacgttcacaggggtagtcctgcagtcattcttacctaaag 656
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaccattgtacttaacggtcacgttcacaggggtagtcctgcagtcattcttacctaaag 206
Query: 657 ca 658
||
Sbjct: 205 ca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1065
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1055
Effective search space: 683640
Effective search space used: 683640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_b03.g1 MSMg01no183_b03.g1 CHROMAT_FILE:
MSMg01no183_b03.g1 PHD_FILE: MSMg01no183_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:59 2005
(626 letters)
>mm_chr15_91693719_91694744
Length = 1026
Score = 1166 bits (603), Expect = 0.0
Identities = 621/627 (99%), Gaps = 2/627 (0%)
Strand = Plus / Plus
Query: 1 agtggttgaatagccaggaacagggacagaggatatgactctaatgtgattataagaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggttgaatagccaggaacagggacagaggatatgactctaatgtgattataagaaca 260
Query: 61 atgcctaaaagaaaaatactgaagcaacttagaacttaaagtcagttttactggatgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcctaaaagaaaaatactgaagcaacttagaacttaaagtcagttttactggatgttg 320
Query: 121 acagactgggaaatagggctcgctttgtgtttaagaagttgggatgtctttcctcctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagactgggaaatagggctcgctttgtgtttaagaagttgggatgtctttcctcctgct 380
Query: 181 tgaagaagaaaaaataaatcaagtcttccagcagttccctagtatatccacgctaccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaagaagaaaaaataaatcaagtcttccagcagttccctagtatatccacgctaccctc 440
Query: 241 agaatgtttctgaggctccggagactcaggagggggagattttgttagaggggatgcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaatgtttctgaggctccggagactcaggagggggagattttgttagaggggatgcctt 500
Query: 301 cctgaataattttagtccaagtaggctaagcctctgtttacccagaaatattaacatcct 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgaataattttagttcaagtaggctaagcctctgtttacccagaaatattaacatcct 560
Query: 361 ttaagagatagtgagaaaacaaataaacaaaaccaaaataaaataaacaaaataataata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaagagatagtgagaaaacaaataaacaaaaccaaaataaaataaacaaaataataata 620
Query: 421 ataacttattattatttgccgcagaccctttttggtccctgtctg-gttgaacaagtctc 479
|||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 621 ataatttattattatttgccgcagaccctttttggtccctgtctgcgtagaacaagtctc 680
Query: 480 tggttgtaggtggacaaggagtcggcgggtgcgaatgaatgacaaacagacatgacacac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggttgtaggtggacaaggagtcggcgggtgcgaatgaatgacaaacagacatgacacac 740
Query: 540 gagattgtgtagaatctgaatgtaatttttttaagtccagcatgaaactttttatacata 599
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 gagattgtgtagaatctgaatgtaatttttc-aagtccagcatgaaactttttatacata 799
Query: 600 agagcaacaagaaaccaggcgagatac 626
|||||||||||||||||||||||||||
Sbjct: 800 agagcaacaagaaaccaggcgagatac 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
