Query= MSMg01no187_n09.b1 MSMg01no187_n09.b1 CHROMAT_FILE:
MSMg01no187_n09.b1 PHD_FILE: MSMg01no187_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:16 2005
(313 letters)
>mm_chr15_32667323_32668035
Length = 713
Score = 582 bits (301), Expect = e-171
Identities = 307/309 (99%)
Strand = Plus / Plus
Query: 4 ggaattctctgaagtaactcaattgcaccctattttcacagctagatacaaaccaatccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgaagtaactcaattgcaccctattttcacagctagatacaaaccaatccc 263
Query: 64 taatggtggctgcagaacatgccaatatcaggaaagatcccattaacacacttgactttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taatggtggctgcagaacatgccaatatcaggaaagatcccattaacacacttgactttt 323
Query: 124 ttgtttaagcaaataagttatgccaagtaagcatgtcctgacaggctcgtcctctaagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 ttgtttaagcaaataagttatgccaagtaagcatgtcctgacaggctcgtcctctgagaa 383
Query: 184 agggaaatctaccacaggaagtaccccagcaatgtagcaggggttgttttggtgtgtgca 243
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 agggaaatctaccacaggaagtaccccagcaatgtagcaggtgttgttttggtgtgtgca 443
Query: 244 gaccagctaaatgagattggtggtgctaggtgccatggtcttgtatttagttggtctatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaccagctaaatgagattggtggtgctaggtgccatggtcttgtatttagttggtctatg 503
Query: 304 tgtgaaatc 312
|||||||||
Sbjct: 504 tgtgaaatc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_n09.g1 MSMg01no187_n09.g1 CHROMAT_FILE:
MSMg01no187_n09.g1 PHD_FILE: MSMg01no187_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:16 2005
(285 letters)
>mm_chr15_32695697_32696381
Length = 685
Score = 406 bits (210), Expect = e-118
Identities = 268/298 (89%), Gaps = 17/298 (5%)
Strand = Plus / Minus
Query: 5 caactcttagggcagtacacaaagggctggctcatttatttgtgctctgcatggtgcaat 64
|||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||||
Sbjct: 613 caacccttagggcagtacacaaagggctgaatcatttatttgtgctccgcattgtgcaat 554
Query: 65 gacataaactttccactagggggcaggcatggctcactcattttgaacact--------- 115
||||| |||||||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 553 aacatagactttccactagggggcaagcatggttcactcattttaaacactaatagggaa 494
Query: 116 --------agatctgagcactttctcttataagtcagacccacagcggctgcagtggaaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cagtgtagagatctgagcactttctcttataagtcagacccacagcggctgcagtggaaa 434
Query: 168 acaggtttccaaaacagtaaacaccaaacaggccattattatctttgtagttcatgagct 227
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 433 acaggtttccaaaacagtagacaccaaacagaccattattatctttgtagttcatgagct 374
Query: 228 gagttgtattttacttataggtataattggatcccacacaattgtgcctctcacattt 285
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gagttgtattttacttagaggtataattggatcccacacaattgtgcctctcacattt 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
