Query= MSMg01no191_a21.b1 MSMg01no191_a21.b1 CHROMAT_FILE:
MSMg01no191_a21.b1 PHD_FILE: MSMg01no191_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:31 2005
(253 letters)
>mm_chr15_99598707_99599361
Length = 655
Score = 476 bits (246), Expect = e-139
Identities = 250/252 (99%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatgttattcctgtacttgatttaatatgtttatatgggaggaagactgaatta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ggaattcatgttattcctgtacttgatttaatatgtttatatgggaggaagactgaatta 532
Query: 64 ttatatgtatattaagacatacatatttaaggtatatatacttaagatatgtaagtatat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttatatgtatattaagacatacatatttaaggtatatatacttaagatatgtaagtatat 472
Query: 124 acaaataaatatatatttttactaaataggattcaggaaatgagaaaatgc--aaaaaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 471 acaaataaatatatatttttactaaataggattcaggaaatgagaaaatgcaaaaaaaaa 412
Query: 182 aaatcccaattatttcgaatagactttttttgtttgttttacacacacatacatacacat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaatcccaattatttcgaatagactttttttgtttgttttacacacacatacatacacat 352
Query: 242 atagacatatag 253
||||||||||||
Sbjct: 351 atagacatatag 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 655
Length adjustment: 9
Effective length of query: 244
Effective length of database: 646
Effective search space: 157624
Effective search space used: 157624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no191_a21.g1 MSMg01no191_a21.g1 CHROMAT_FILE:
MSMg01no191_a21.g1 PHD_FILE: MSMg01no191_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:31 2005
(285 letters)
>mm_chr15_99453654_99454338
Length = 685
Score = 524 bits (271), Expect = e-153
Identities = 277/279 (99%)
Strand = Plus / Plus
Query: 4 gtgcagatgagggtgaccaactctttgcctctggccctctattaccacacctagcccaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtgcagatgagggtgaccaactctttgcctctggccctctattaccacacctagcccaga 263
Query: 64 tattataaagagctggaagctcagggaaatggccccacggccaagctcctgaagaagcac 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tattacaaagagctggaagctcagggaaatggccccacggccaagctcctgaagaagcac 323
Query: 124 aaactcggtcgggcagaactgacctttaacgtctggtgtgcgtggtgttgagtttccatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaactcggtcgggcagaactgacctttaacgtctggtgtgcgtggtgttgagtttccatt 383
Query: 184 gcctcgctggctgtctatgttctcttggtccaccatcatgaactgattccagtactccag 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcctcgctggctgtctatgttctcttggtccaccatcatgaactgattccagtactccaa 443
Query: 244 ggggagagagagtaggcgctccaccacctaaagggcaca 282
|||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggggagagagagtaggcgctccaccacctaaagggcaca 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
