Query= MSMg01no193_d04.b1 MSMg01no193_d04.b1 CHROMAT_FILE:
MSMg01no193_d04.b1 PHD_FILE: MSMg01no193_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:29 2005
(667 letters)
>mm_chr15_92726704_92727770
Length = 1067
Score = 1123 bits (581), Expect = 0.0
Identities = 605/613 (98%), Gaps = 2/613 (0%)
Strand = Plus / Minus
Query: 5 gaattctatttcaacaatcacattttaaaaccacttttggatgcaccaaaacacccgact 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaattctatttcaacaatcagattttaaaaccacttttggatgcaccaaaacacccgact 553
Query: 65 tttgaatataaaagatttcctcatttaaaaagaatctcaaagaatgtacagttttataat 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttcgaatataaaagatttcctcatttaaaaagaatctcaaagaatgtacagttttataat 493
Query: 125 aaatttcgaatcgttaaaagagccctgtgtgctcatgtattattgatttgcacaattatg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 492 aaatttcgaatcgttaaaagagccctgtgtgctcatgtattattgatttgcacaattacg 433
Query: 185 aggcaagcagaggactgtattttgcactactagcattgttctgtcagtgtgagcataaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aggcaagcagaggactgtattttgcactactagcattgttctgtcagtgtgagcataaca 373
Query: 245 aagcgcctctcttacctccctctctaaaattatgcctctgattttacatagctgataacg 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aagcgcctctctcacctccctctctaaaattatgcctctgattttacatagctgataacg 313
Query: 305 tagccatttgggaacatagcttattatgaccataatttgaaaaattcaacagggactgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tagccatttgggaacatagcttattatgaccataatttgaaaaattcaacagggactgtc 253
Query: 365 agaacttgaaattcagaatgatatctacagagaaaatcgggaggcatgcctctccccccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 252 agaacttgaaattcagaatgatatctacagagaaaatcgggaggcatgcctctcccctcc 193
Query: 425 cccattgccctccactccccctccccta-tcctctccctcccctcggtggttcctctgct 483
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 192 cc-attgccctccactccccctcccctactcctctccctcccctcggtggttcctctgct 134
Query: 484 tcagtgtctgaagtatacactgttaattgttgatgtaatttccagtattccatattcctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcagtgtctgaagtatacactgttaattgttgatgtaatttccagtattccatattcctg 74
Query: 544 agaaaatgagatttttgtcttttcctaagtcttcacaaactacagcactaagaaatgacg 603
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 agaaaataagatttttgtcttttcctaagtcttcacaaactacagcactaagaaatgacg 14
Query: 604 tttcaaagaattt 616
|||||||||||||
Sbjct: 13 tttcaaagaattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_d04.g1 MSMg01no193_d04.g1 CHROMAT_FILE:
MSMg01no193_d04.g1 PHD_FILE: MSMg01no193_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:30 2005
(295 letters)
>mm_chr15_92670795_92671488
Length = 694
Score = 516 bits (267), Expect = e-151
Identities = 288/295 (97%), Gaps = 1/295 (0%)
Strand = Plus / Plus
Query: 1 catttagtcttttaaagcacagtcatgaaagccgggtctgggatgtttaggcaccactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 201 catttagtcttttaaagcacagtcatgaaagccgggtctgggatgtttagg-agcactga 259
Query: 61 tatttcctccagagcttgcacctgtacatcgtcaaggggtcctgatcctgagcagacact 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatttcctccagagctcgcacctgtacatcgtcaaggggtcctgatcctgagcagacact 319
Query: 121 tgacggaggccacacaaagatcacagcacaaaggggattgtgtggactgtgtggtgacca 180
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 320 tgatggaggccacacaaagatcacagcacaaaggggattgtgtggactgtatggtgacca 379
Query: 181 gtgtgtcctggacgtaatgtctgcacatccagtttatatactgaaaatacaacccgcagt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 gtgtgtcctggacgtaatgtctgcacatccagtttatatactgataatacaacccgcagt 439
Query: 241 gggagagaaggtgcccagtgtgcggggtctgccttttggagatgaaaggattgtt 295
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 gggagagaaggtgcccagtgtgtggggtctgccttttggagatgaaaggattgtt 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 694
Length adjustment: 9
Effective length of query: 286
Effective length of database: 685
Effective search space: 195910
Effective search space used: 195910
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
