CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTAGTTCTGTACCCCATTTTTTAATAGGGTATTTGATTTTC
TGGAGTCCAGCTTTTTGAGTTCTTTGTATATATTGGATAGTAGTCCCCTG
TCAGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTT
TGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGA
GGTCCCATTTGTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGA
ATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTTCCCACTTTCTCCTCT
AGAAGTTTCAATGTCTCTGGTTTTATGCGCAGCTCCTTGATCCACTTAGA
CTTGAGATTTGTACAAGGAGATAAGAATGGACCAATTTGCATACTAACCA
CCAGTTGAGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGA
TGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCACTCTGGAAATCAGTC
TGGTGGTTCCTCAGAAAATTGGACATAGTACTACCGGAAGATCCAGCAAT
ACCTCTCCTGGGTATATACCCAGAAAATGTTCCAAATTGTAATAGGGATA
CATACTCTACTATGTTCATAACAGCCTTATTTCTAATAGCCAGAAGCTAG
AATGAACCCAGATGTCCCTCTTCTAAGGATTGGATACAG

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGTACCATGGACAAAATTGGGCT
CCGAACCTGTGGTAATTACCATCAACACAATGGAATGCATCTTGAAACTT
AAAGATGGAATACAGGTAAGAAACTGCTGAGCCTAGTTGTTAGTATTATT
ACTTTCCACAGTAATATAATTTGTCATATCTTAGCTTGAGTGATACTTTC
TATATCTGACATTGGCAATTAGTGACTGTTAAAATGTTGTTGTTATTGTT
GTCATTACTGGGGTTTGCTTTGCTTTGCTTTTCTTTCTTTTTTTTTCAGA
GCTGAGAACCGAGAGTGCTAGGCAAGTGCTCTACCACTGAGCTAAATCCC
CAACCACTTACTTTCTATATGTCTATAAAAGTAACATGATTTAAAAAAAG
ATGTTTTTAAATTTGGATAAAGCATCTAAAGGGTGTTTTTTAATATAAAT
TTTGATTAGTTAGATCCCTTGGTACTAGGGAGCATGTAAATTTCTCATTA
CCTATATTCAGAATAAATGAGAGGCCTGATAAACTCCAGTTTTTAATGAG
ATTTTTACTAGTTGATCTAATTCTAGTCAAACTTGGTAAAAACTAAAGAA
GTGTTTTGAAAAAAACTACAGAAGTGTTTTGAAGTTTTTGCAGAGGTCGT
ATATGGCTTTTTACTTACTGACATATCTAG

Query= MSMg01no193_l17.g1 MSMg01no193_l17.g1 CHROMAT_FILE:
MSMg01no193_l17.g1 PHD_FILE: MSMg01no193_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:19 2005
         (493 letters)



>mm_chr15_35308506_35309399
          Length = 894

 Score =  872 bits (451), Expect = 0.0
 Identities = 486/501 (97%), Gaps = 8/501 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtaccatggacaaaattgggctccgaacctgtggtaattaccatcaacacaatggaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 194 atgtaccatggacaaaattgggctccgaacctgtggtaattaccatcaatacaatggaat 253

                                                                       
Query: 61  gcatcttgaaacttaaagatggaatacaggtaagaaactgctgagcctagttgttagtat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gcatcttgaaacttaaagatggaatacaggtaagaaactgctgagcctagttgttagtat 313

                                                                       
Query: 121 tattactttccacagtaatataatttgtcatatcttagcttgagtgatactttctatatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tattactttccacagtaatataatttgtcatatcttagcttgagtgatactttctatatc 373

                                                                       
Query: 181 tgacattggcaattagtgactgttaaaatgttgttgttattgttgtcattactggggttt 240
           |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 374 tgacattggctattagtgactgttaaaatgttgttgttattgttgttgttactggggttt 433

                                                                       
Query: 241 gctttgctttgctttt--ctttcttttttttt-----cagagctgagaaccgagagtgct 293
           ||||| |||| |||||  ||||||||||||||     |||||||||||||||||||||||
Sbjct: 434 gcttttcttttcttttttctttcttttttttttttttcagagctgagaaccgagagtgct 493

                                                                       
Query: 294 aggcaagtgctctaccactgagctaaatccccaaccacttactttctatatgtctataaa 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aggcaagtgctctaccactgagctaaatccccaaccacttactttctatatgtctataaa 553

                                                                       
Query: 354 agtaacatgattt-aaaaaaagatgtttttaaatttggataaagcatctaaagggtgttt 412
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agtaacatgattttaaaaaaagatgtttttaaatttggataaagcatctaaagggtgttt 613

                                                                       
Query: 413 tttaatataaattttgattagttagatcccttggtactagggagcatgtaaatttctcat 472
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttaaatataaattttgattagttagatcccttggtactagggagcatgtaaatttctcat 673

                                
Query: 473 tacctatattcagaataaatg 493
           |||||||||||||||||||||
Sbjct: 674 tacctatattcagaataaatg 694


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space:   426972
Effective search space used:   426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)