Query= MSMg01no194_a07.b1 MSMg01no194_a07.b1 CHROMAT_FILE:
MSMg01no194_a07.b1 PHD_FILE: MSMg01no194_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:46 2005
(654 letters)
>mm_chr15_43375044_43376097
Length = 1054
Score = 1210 bits (626), Expect = 0.0
Identities = 644/650 (99%)
Strand = Plus / Plus
Query: 5 gaattcattggatgacctccaaatagcaaattggtaggcctttaatgatacatttatacc 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattggatgaccttaaaatagcaaattggtaggcctttaatgatacatttatacc 264
Query: 65 acttttagtacctttaaacatggatttgcctgaaaataaatgtagaaaactatgtttggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acttttagtacctttaaacatggatttgcctgaaaataaatgtagaaaactatgtttggt 324
Query: 125 gattaacattttgtcttgcaaattcagccttatattcagacctttcaatctatgaaaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gattaacattttgtcttgcaaattcagccttatattcagacctttcaatctatgaaaaac 384
Query: 185 agttatcactacaaacaataataatgaaatacaattattctatgcaaatatgtatcaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agttatcactacaaacaataataatgaaatacaattattctatgcaaatatgtatcaata 444
Query: 245 aaatgattcctaatgacattctgctatgcctatagctcaattccttactcgccatcacca 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatgattcctaatgacattctgctatgcctatagctcaattccttactcgccatcaccg 504
Query: 305 gagacccacaaccaataactatgcaaagaatgagaggccttggaatgctcagtcctaaat 364
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagacccacaaccaaaaactatgcaaagaatgagaggccttggaatgctcagtcctaaat 564
Query: 365 caaattcctcccctcaagactcagggaaccctgtggaagagaagagtcaaagagtagaaa 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 caaattcctcccctcaagactcagggaaccctgtggaagagaagagtcaaagagtataaa 624
Query: 425 agccaaaggggatgaaggatactgataaaacaatactttgtaaatcaatatgaccaaagt 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtcaaaggggatgaaggatactgataaaacaatactttgtaaatcaatatgaccaaagt 684
Query: 485 acgtatgaactcacagagatggaagcagcatatacaaggccttcaagggtctgcatcaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acgtatgaactcacagagatggaagcagcatatacaaggccttcaagggtctgcatcaca 744
Query: 545 tcctttgcatatatattacggtttctattttagtgtttttataggatccctgagtggata 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcctttgcatatatattacggtttctattttagtgtttttataggatccctgagtggata 804
Query: 605 aacaagtggctctctgtttcttgtgtcttctctcaggctcttttccttta 654
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aacaagtggctctctgtttcttgtgtcttctctcaggctcttttccttta 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_a07.g1 MSMg01no194_a07.g1 CHROMAT_FILE:
MSMg01no194_a07.g1 PHD_FILE: MSMg01no194_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:46 2005
(589 letters)
>mm_chr15_43479201_43480189
Length = 989
Score = 1079 bits (558), Expect = 0.0
Identities = 582/590 (98%), Gaps = 2/590 (0%)
Strand = Plus / Minus
Query: 1 tcatctcatatcatttctgcaaaagtcctgatctgttacaatattccagatttgataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tcatctcatatcatttctgcaaaagtcctgatctgttacaatattccagatttgataatg 730
Query: 61 agcatgagataacagaactttatccatatctaaaactggttagctacatgcatttggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agcatgagataacagaactttatccatatctaaaactggttagctacatgcatttggcaa 670
Query: 121 gccaactagactcatttatttatctggaaaataagactaattattttactactaatattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 669 gccaactagactcatttatttatctggaaaataagactaattattttactacttatattt 610
Query: 181 gcttcaaaaatagtcactatttgtgaaacttatgatgctttatgtaatggtattaagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcttcaaaaatagtcactatttgtgaaacttatgatgctttatgtaatggtattaagtac 550
Query: 241 cgtttttaattatttcattactttatgagccataatactgttaagtatattccactgttc 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 catttttaattatttcattactttatgagccataatactgttaagtatattccactgttc 490
Query: 301 agaaaatttggccaatcttcaatactaccttatttaacacaaaaacaacatgagctcaaa 360
||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 489 agaaaatttggccaatcttcaatactaccttatttaacacaaaaataatacgagctcaaa 430
Query: 361 ggatataaaaaaatcaatgctgaaaaatgtacggaacaatcatatgcaaatatttgaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggatataaaaaaatcaatgctgaaaaatgtacggaacaatcatatgcaaatatttgaaga 370
Query: 421 tacacctttctgataatgaatgacaagttagctcactggcagaaagataatcattatttg 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tacgcctttctgataatgaatgacaagttagctcactggcagaaagataatcattatttg 310
Query: 481 atatatttattagttattagaaag-tagatggaaacagagatgttatgggaaaaaaagag 539
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 309 atatatttattagttattag-aagctagatggaaacagagatgttatgggaaaaaaagag 251
Query: 540 ttatgtgctctcctgtaggaggaggtgctaatactaaagtctggttccct 589
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttatgtgctctcctgtaggaggaggtgctaatactaaagtctggttccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
