Query= MSMg01no195_a11.b1 MSMg01no195_a11.b1 CHROMAT_FILE:
MSMg01no195_a11.b1 PHD_FILE: MSMg01no195_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:06 2005
(319 letters)
>mm_chr15_90011478_90012196
Length = 719
Score = 342 bits (177), Expect = 1e-98
Identities = 183/185 (98%)
Strand = Plus / Minus
Query: 135 ttctaattaagttcattcctaaaggtggtttttatgttagctcctttttcaaagaaactt 194
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 522 ttctaattaagttcattcctaaaggtggtttttatgttagctcccttttcaaagaaactt 463
Query: 195 cagtcatcctctctctagctaacattttccaaatctcaccctaacaaatgagaaacataa 254
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 462 cagtcatcctctctctagctaacattttccaaatctcatcctaacaaatgagaaacataa 403
Query: 255 ggtgtttttgttagttgtacacttccctttctgactctgagtgtttagaaagagtcatct 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggtgtttttgttagttgtacacttccctttctgactctgagtgtttagaaagagtcatct 343
Query: 315 caaag 319
|||||
Sbjct: 342 caaag 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_a11.g1 MSMg01no195_a11.g1 CHROMAT_FILE:
MSMg01no195_a11.g1 PHD_FILE: MSMg01no195_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:06 2005
(287 letters)
>mm_chr15_89950392_89951076
Length = 685
Score = 516 bits (267), Expect = e-151
Identities = 282/289 (97%), Gaps = 6/289 (2%)
Strand = Plus / Plus
Query: 1 caagaaatacatatgaaactctagaataatgttctttggggagtagaccagaatccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagaaatacatatgaaactctagaataatgttctttggggagtagaccagaatccaaaa 260
Query: 61 actttctaggaattatt-tttttttcctgccaggttagaaaagcatccaaattatatttt 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actttctaggaattattatttttttcctgccaggttagaaaagcatccaaattatatttt 320
Query: 120 ggtaaatagttttactgcccgaaggattagtctcacattgttctaagaaccacctggtaa 179
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gg----tagttttactgcctgaaggattagtctcacattgttctaagaaccacctggtaa 376
Query: 180 cagataccaaggtcataggcttctgttccagtgtagacatcttcgtcacaagc-ttacat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 377 cagataccaaggtcataggcttctgttccagtgtagacatcttcgtcacaagccttacat 436
Query: 239 cgaaaaacggaaggaatagtgagaaagaaatggtgtaaatggagttcca 287
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cgaaaaacggaaggaatagtgagaaagaaatggtgtaaatggagttcca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 685
Length adjustment: 9
Effective length of query: 278
Effective length of database: 676
Effective search space: 187928
Effective search space used: 187928
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
