Query= MSMg01no202_l04.b1 MSMg01no202_l04.b1 CHROMAT_FILE:
MSMg01no202_l04.b1 PHD_FILE: MSMg01no202_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:36 2005
(292 letters)
>mm_chr15_95882123_95882815
Length = 693
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 5 gaattctggcttctcagaaag-aaatctagtcgctctaactctgattcaagttcaagctg 63
|||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct: 493 gaattctggcttctgagaaagtaaatctagtcactctaactttgattcaagttcaagctg 434
Query: 64 actcttgggttactcaccagtaaccaaggggctaagaatgttttagccacacgacacact 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 actcttgggttagtcaccagtaaccaaggggctaagaatgttttagccacacgacacact 374
Query: 124 gtggacccaggttctagaaaggcaagggttggccgtctgctgtctgggtcccttcaaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtggacccaggttctagaaaggcaagggttggccgtctgctgtctgggtcccttcaaagg 314
Query: 184 gtctactgcagagggtgacttttgacatacgttgacaagagttagtaggaaaagcccgtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtctactgcagagggtgacttttgacatacgttgacaagagttagtaggaaaagcccgtg 254
Query: 244 cggttgccgctcatccggggacagcctcctctgagactttgttctccaa 292
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cggttgccgctcatccggggacagcctcctctgagactttgttctccaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no202_l04.g1 MSMg01no202_l04.g1 CHROMAT_FILE:
MSMg01no202_l04.g1 PHD_FILE: MSMg01no202_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:36 2005
(619 letters)
>mm_chr15_95833051_95834074
Length = 1024
Score = 1122 bits (580), Expect = 0.0
Identities = 611/624 (97%), Gaps = 5/624 (0%)
Strand = Plus / Plus
Query: 1 cctgcttcaggggtcttccctgagttttctcttgggaataaccccccacacttggatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgcttcaggggtcttccctgagttttctcttgggaataaccccccacacttggatgtg 260
Query: 61 tctttcttatccctaccccatcccttccccataatcccttctctcccacccctcccc--- 117
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tctttcttatccctaccccatcccttccccataatcccttctctcccacccccccccctc 320
Query: 118 --ttgagaatcacaccctcatatgtgggtatgcctgtccttctgagcacccttccttcta 175
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tcttgagaatcacaccctcatatgtgggtatgcctgtccttttgagcacccttccttcta 380
Query: 176 agcccatattcaaacatctttaataaaatctccaagtctgcttcattacactgtcaggtc 235
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacccatattcaaacatctttaacaaaatctccaagtctgcttcattacactgtcaggtc 440
Query: 236 ttaaaatccttttcagcaacgaagctacaaatctgagtttgacctgagttaagagtacct 295
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaaatccttttcagcaaaggagctacaaatctgagtttgacctgagttaagagtacct 500
Query: 296 gaaagaccggttcccttattctcagaactcttcaagctgctaagggtgacaatagagctg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaagaccggttcccttattctcagaactcttcaagctgctaagggtgacaatagagctg 560
Query: 356 tctccttaccactaactacagaatcataaaagatgggagtggcagaaagaactctctaca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tctccttaccactaactacagaatcataaaagatgggagtggcagaaagaactctcttca 620
Query: 416 catgtgacatccaccggctgcttcgtcacacctctatctactaaagctgtctctaatgtc 475
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 catgtgacatccaccggctgcttcgtcacacctctatctaccaaagctgtctctaatgtc 680
Query: 476 ttccactgtcttgtcctgcatacagcctgctggatttttaatcctctcccttcccagctc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttccactgtcttgtcctgcatacagcctgctggatttttaatcctctcccttcccagctc 740
Query: 536 tgtcctgagcctccatctgataaggagggcttgtggtttcttctgtgtatgctgctgaat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtcctgagcctccatctgataaggagggcttgtggtttcttctgtgtatgctgctgaat 800
Query: 596 tccttacatgtttgtggaattcca 619
||||||||||||||||||||||||
Sbjct: 801 tccttacatgtttgtggaattcca 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1024
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1014
Effective search space: 617526
Effective search space used: 617526
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
