Query= MSMg01no209_h22.b1 MSMg01no209_h22.b1 CHROMAT_FILE:
MSMg01no209_h22.b1 PHD_FILE: MSMg01no209_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:38 2005
(320 letters)
>mm_chr15_73056667_73057386
Length = 720
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Minus
Query: 9 tcagtcttaaaagaaaagctggaatttgcagagcaaacaggcacaggaaatacattccag 68
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 520 tcagtcttaaaagaaaagctggaatttgcacagcaaacaggcacaggaaatacattccag 461
Query: 69 gcagtgggaagagcgtgggtattgatgtggggtcatgggactagtttagccagatgtgac 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcagtgggaagagcgtgggtattgatgtggggtcatgggactagtttagccagatgtgac 401
Query: 129 ccaagctggtctctgtgggagttggggaattctcatcagaaggctcagaggtgcctgtat 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ccaagctggtctctgtgggagttggggaattctcatcagaaggctcagaggtgcctgtat 341
Query: 189 tctacaggcttactctttctttgagattattttcatacactgcacctcatcctgaaatac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctacaggcttactctttctttgagattattttcatacactgcacctcatcctgaaatac 281
Query: 249 atggtaacttttggtaaagtctaactcatgctctgtgcagaatgtctccagcctccaggt 308
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 280 atggtaacttttggtaaagtctaactcatgctctgtgcaggatgtctccagcctccaggt 221
Query: 309 agctccaagtgt 320
||||||||||||
Sbjct: 220 agctccaagtgt 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_h22.g1 MSMg01no209_h22.g1 CHROMAT_FILE:
MSMg01no209_h22.g1 PHD_FILE: MSMg01no209_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:38 2005
(292 letters)
>mm_chr15_72985370_72986061
Length = 692
Score = 495 bits (256), Expect = e-144
Identities = 279/292 (95%), Gaps = 10/292 (3%)
Strand = Plus / Plus
Query: 1 attctggccatcacctaaggtctcgataaaccacaaggcccttcagtgatgtcctcccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctggccatcacctaaggtctcgataaaccacaaggcccttcagtgatgtcctcccgt 260
Query: 61 gtagtgggggatggaggatatccctctgccacgagaggaaaggaaggcaaggacctcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 gtagtgggggatggaggatatccctctgccacgagaggaaaggaaggcagggacctcgtc 320
Query: 121 ctctagaaacttgtttatccttgaaagttactagctgcctgggagttttttgctttgatc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctagaaacctgtttatccttgaaagttactagctgcctgggagttttttgctttgatc 380
Query: 181 acacctgatttaaaaaacaaaacaaaaaacaaaacaaaacaaaacaaaaaaaaaaccctc 240
|||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 381 acacctgatttaaaaaacaaaa--------aaaacaaaacaaaacaaaaaaaa--ccctc 430
Query: 241 tgggaaatctcttgtcatcatagctagtttgggtgagacaggaaatggggtc 292
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 431 tgggaaatctcttgtcatcatagccagtttgggtgagacaggaaatggggtc 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
