Query= MSMg01no213_l17.b1 MSMg01no213_l17.b1 CHROMAT_FILE:
MSMg01no213_l17.b1 PHD_FILE: MSMg01no213_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:50 2005
(690 letters)
>mm_chr15_36241864_36242953
Length = 1090
Score = 1174 bits (607), Expect = 0.0
Identities = 632/641 (98%), Gaps = 2/641 (0%)
Strand = Plus / Minus
Query: 51 tttcctattgctttgataaaacaccgtaacacaggaaagccatttgggttcacacttcca 110
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1090 tttcctattgctttgataaaacaccgtaacaaaggaaagccatttgggttcacacttcca 1031
Query: 111 gaagg--atgagtccatcatgaggaagcagcaggcatggtggcaagcaaggccacacgtc 168
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 gaaggatatgagtccatcatgaggaagcagcaggcatggtggcaagcaaggccacacgtc 971
Query: 169 ctatgtcttcccaaacagtgacaccaactagaggttaaatattcaaatgtctgaaactat 228
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ctatgccttcccaaacagtgacaccaactagaggttaaatattcaaatgtctgaaactat 911
Query: 229 gggagaatattcaaagcaccagagagcagaacaaataatcttcactctggcaatgcataa 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gggagaatattcaaagcaccagagagcagaacaaataatcttcactctggcaatgcataa 851
Query: 289 tcgcatcccagtaaaactcacagtcttctctctgtgctcattatgttaatatagtctgga 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tcgcatcccagtaaaactcacagtcttctctctgtgctcattatgttaatatagtctgga 791
Query: 349 gtcttaagaaaatgtctgacagcagttaaagcagacatattaaaatgtggctttgatgat 408
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 790 gtcttaagaaaatgtctgacagcagttaaagcagacatattaaaatgtggctttgacaat 731
Query: 409 aggtgtagactcatgggatagatattaatatatagaactaatcatgcattctaggcaaga 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aggtgtagactcatgggatagatattaatatatagaactaatcatgcattctaggcaaga 671
Query: 469 attcatttgttgctaaatcttatttgatacgttcagaacaagtgaattgtatcaattcat 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 attcatttgttgctaaatcttatttgatacgttcagaacaagtgaattgtatcaattcat 611
Query: 529 gactaaaagcaattcctttcttatttctgagagaaggcaagagatagatatccttgttga 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gactaaaagcaattcctttcttatttctgagagaaggcaagagatagatatccttgttga 551
Query: 589 ttgagaagaatgatggagccacatcttggcacaattataggaagtaaacagatgggaaat 648
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 550 ttgagaagaatgatggagccacatcttggcacaatgataggaagtaaacagatgggaagt 491
Query: 649 aggagaaaggccacacaggcaggaaaagccatgagttttca 689
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 490 aggagaaaggccacacaggcaggaaaagccgtgagttttca 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_l17.g1 MSMg01no213_l17.g1 CHROMAT_FILE:
MSMg01no213_l17.g1 PHD_FILE: MSMg01no213_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:50 2005
(657 letters)
>mm_chr15_36208900_36209956
Length = 1057
Score = 1237 bits (640), Expect = 0.0
Identities = 652/656 (99%)
Strand = Plus / Plus
Query: 1 ttatttaaaatttgctttttccactctcatataccaagtatgacatatgaccactctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ttatttaaaatttgctttttccactctcatataccaagtatgacatatgacaactctata 260
Query: 61 gaaacaatgaagtattcaagtcttaaacacctaaaattatttcaatgccttttttgtttg 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gaaacaatgaagtattcaagtcttaaacacctaaaataatttcaatgccttttttgtttg 320
Query: 121 aagtctaccaccatctgaaatagagatgtgttaggcaataaatattctttacttatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtctaccaccatctgaaatagagatgtgttaggcaataaatattctttacttatgttt 380
Query: 181 caacatgatgcatcttctgccagttaacaaagaattggcatagtgacttattcctaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caacatgatgcatcttctgccagttaacaaagaattggcatagtgacttattcctaatat 440
Query: 241 tcttattccacccctctagtgacccctaagagtgaaacggctcttgtaccatgaatagct 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tcttattccacccctctagtgacccctaagagtgaaacggctcttgtaccgtgaatagct 500
Query: 301 agcatgttgttgtaccgtcaatagctagcatgttgccacttgaactttaaaaagaaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcatgttgttgtaccgtcaatagctagcatgttgccacttgaactttaaaaagaaagga 560
Query: 361 aaattattcctagttggagggggaaactgcctaggtaaagaaaattcagttattcttcat 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 aaattattcctagttggagggggaaactgactaggtaaagaaaattcagttattcttcat 620
Query: 421 aactaatctaattaatatttgctaaatatgagtcgagctagtctttagtcagagtattcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactaatctaattaatatttgctaaatatgagtcgagctagtctttagtcagagtattcc 680
Query: 481 ctgtatgcgcctgggccttttaaaactggctattgctttgttctgaagaactagctggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtatgcgcctgggccttttaaaactggctattgctttgttctgaagaactagctggac 740
Query: 541 aaatggaatcaatgttaatatgcaatcaaatatgactttaaaaaaattcaactttacttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaatggaatcaatgttaatatgcaatcaaatatgactttaaaaaaattcaactttacttt 800
Query: 601 ggctgttagcccaagatagccaaggtttgtttgtttagctaaatgtcaactataaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggctgttagcccaagatagccaaggtttgtttgtttagctaaatgtcaactataaa 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
