Query= MSMg01no218_b16.b1 MSMg01no218_b16.b1 CHROMAT_FILE:
MSMg01no218_b16.b1 PHD_FILE: MSMg01no218_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:01 2005
(315 letters)
>mm_chr15_73500434_73501148
Length = 715
Score = 565 bits (292), Expect = e-165
Identities = 303/310 (97%), Gaps = 6/310 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttaaggagctttcctttggccctgttgagttaggcatggtggtgcacacttgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggaattcttaaggagctttcctttggccctgttgagttaggcatggtggtgcacacttgt 628
Query: 64 gatcccaatacttgggaagatgaggctggaaggttatcttaagatctagggcagtttgag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatcccaatacttgggaagatgaggctggaaggttatcttaagatctagggcagtttgag 568
Query: 124 ctatggacaccacacacacacacacacacacacacacacacacacacatacacacacaca 183
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 567 ctatggacaccacacatacacacacacacacacacacacacac------acacacacaca 514
Query: 184 tcatttctgcctgcctggtaaaccccatcctgacagtgcctctgtttgtatccagatatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcatttctgcctgcctggtaaaccccatcctgacagtgcctctgtttgtatccagatatc 454
Query: 244 agctatgagcatcctcagatgtcacctcactatgctccaacagacacctacaaccttggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agctatgagcatcctcagatgtcacctcactatgctccaacagacacctacaaccttggg 394
Query: 304 ctgagaagca 313
||||||||||
Sbjct: 393 ctgagaagca 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_b16.g1 MSMg01no218_b16.g1 CHROMAT_FILE:
MSMg01no218_b16.g1 PHD_FILE: MSMg01no218_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:01 2005
(275 letters)
>mm_chr15_73356172_73356846
Length = 675
Score = 470 bits (243), Expect = e-137
Identities = 261/267 (97%)
Strand = Plus / Plus
Query: 1 acttgagcggttcacttttcaaacagagctgcctcttagacatagttcattgttgagtct 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttagcggttcacttttcaaacagagctgcctcttagacatagttcattgttgagtct 260
Query: 61 gcggtagacagggtctttgtagaatggaaagcttggttggtcttagggagtgagatgagg 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gcggtagacagggtctttgtagaacagaaagcttggttggtcttagggagtgagatgagg 320
Query: 121 aattgactgtttatggaaaggtctggcagctcagggagtgatggaggggccttaggagtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattgactgtttatggaaaggtctggcagctcagggagtgatggaggggccttaggagta 380
Query: 181 gttcccctcacctcctcactgatggtcttcatttctgggaagtggacagccatgctcttt 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gttcccctcacctccttactgatggtcttcatttctgggaagtggacagccatgctctct 440
Query: 241 ctcccaggctctcttccacagagcagg 267
|||||||||||||||||||||||||||
Sbjct: 441 ctcccaggctctcttccacagagcagg 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
