Query= MSMg01no232_a17.b1 MSMg01no232_a17.b1 CHROMAT_FILE:
MSMg01no232_a17.b1 PHD_FILE: MSMg01no232_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:27 2005
(317 letters)
>mm_chr15_31899425_31900137
Length = 713
Score = 497 bits (257), Expect = e-145
Identities = 300/329 (91%), Gaps = 27/329 (8%)
Strand = Plus / Plus
Query: 5 gaattcatccttcagaccagtcagtcaataca---------------gcttagaaaacaa 49
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 190 gaattcatccttcagaccagtcagtcaatacaaacttagaaaacaaagcttagaaaacaa 249
Query: 50 agacttcaatatgtcggattg----tttatcccccctgccacgcctataagtttatagct 105
||||||||||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 250 agacttcaatatgtcagattgcagatt-----cccctgccacgcctataagtttatagct 304
Query: 106 gcaccatgactcaaccttctgagttacacgaagcttttccaaaagcagggcaggaagtgt 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcaccatgactcaaccttctgagttacacgaagcttttccaaaagcagggcaggaagtgt 364
Query: 166 ttgatggcttcttaatactataaaaaatgagaggttataagtctaggaacaaaaatatgt 225
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 365 ttgatggcttcttaatactataaaaaatgag--gttataagtctaggaacaaaaatatgt 422
Query: 226 atacataaataaatgtacttttattaatctagaaaaaaagctatgtattacagtgggata 285
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 423 atacataaataaatgtacttttattaatctagaaaaaa-gctatgcattacagtgggata 481
Query: 286 tttatacaggtgtattagtttgttatatg 314
|||||||||||||||||||||||||||||
Sbjct: 482 tttatacaggtgtattagtttgttatatg 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 713
Length adjustment: 9
Effective length of query: 308
Effective length of database: 704
Effective search space: 216832
Effective search space used: 216832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_a17.g1 MSMg01no232_a17.g1 CHROMAT_FILE:
MSMg01no232_a17.g1 PHD_FILE: MSMg01no232_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:27 2005
(284 letters)
>mm_chr15_32078170_32078852
Length = 683
Score = 509 bits (263), Expect = e-148
Identities = 278/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 ctggctattttcatcaccctaactctccaaattgcaaaggtctgttttcactgatgatgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 482 ctggctattttcatcaccctaactctccaaattgcaaaggtctgttttcactgatgttgc 423
Query: 61 atggccgttgtggtgcactagtgctctggtccacattagtcttcattcagaaaggcaaaa 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgcccgttgtggtgcactagtgctctggtccacattagtcttcattcagaaaggcaaaa 363
Query: 121 tggaactttcaagtaagtttgtggattagaagccacatctttaagatcaaatgaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 362 tggaactttcaagtaagtttgtggattagaagccacatctttaagatcaaatg-aaaaaa 304
Query: 181 aaaagtggctaagaaaccagagattctattcatattaagacaaacagaaataagcctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaaagtggctaagaaaccagagattctattcatattaagacaaacagaaataagcctagg 244
Query: 241 aggtattttccctacaaagcaacagccaagccagtacccaatg 283
||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 243 agggattttccctacaaagcaacagccaagccagtatccaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 683
Length adjustment: 9
Effective length of query: 275
Effective length of database: 674
Effective search space: 185350
Effective search space used: 185350
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
