Query= MSMg01no234_j22.b1 MSMg01no234_j22.b1 CHROMAT_FILE:
MSMg01no234_j22.b1 PHD_FILE: MSMg01no234_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:39 2005
(318 letters)
>mm_chr15_102946770_102947487
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 5 gaattcctcttcttgtaccatactcaggcaagcttctctctcttcccagcttctcccttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcctcttcttgtaccatactcaggcaagcttctctctcttcccagcttctcccttg 459
Query: 65 aaaaagtctacttaccaaaacgcacattgctgacaggtctttgggtgtacttgtgggttg 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaaagtctacttaccaaaacgcacgttgctgacaggtctttgggtgtacttgtgggttg 399
Query: 125 gcgcctctgctcagaagcttctgggatttatctgtgtgtctctgggttcaacattcacgt 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcgcctccgctcagaagcttctgggatttatctgtgtgtctctgggttcaacattcacgt 339
Query: 185 atccagggtaggttattatacacacagtgcaagcaggaatcctccagcctaccagtcagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atccagggtaggttattatacacacagtgcaagcaggaatcctccagcctaccagtcagc 279
Query: 245 ctgacaaccccagtcagggaggatgcagaggcctttgaggatctgagaggaacctacacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctgacaaccccagtcagggaggatgcagaggcctttgaggatctgagaggaacctacacc 219
Query: 305 ctttccccagaagc 318
||||||||||||||
Sbjct: 218 ctttccccagaagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no234_j22.g1 MSMg01no234_j22.g1 CHROMAT_FILE:
MSMg01no234_j22.g1 PHD_FILE: MSMg01no234_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:39 2005
(648 letters)
>mm_chr15_102924596_102925643
Length = 1048
Score = 1224 bits (633), Expect = 0.0
Identities = 645/649 (99%), Gaps = 2/649 (0%)
Strand = Plus / Plus
Query: 1 aaggtaagcctcggttaagcagtgatcttggggctagcctgtgctacatgca-actccat 59
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 aaggtaagcctcggttaagcagtgatcttggggctagcctgtgctacatg-agactccat 259
Query: 60 tgaaaaggaaaactttgaaggacctagggtttctggcaagccctgcataaaatgtcatcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaaaaggaaaactttgaaggacctagggtttctggcaagccctgcataaaatgtcatcg 319
Query: 120 tgcaaaattaagcaggatatatataggctgtagtcttataagcctctttgtatgatcagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcaaaattaagcaggatatatataggctgtagtcttataagcctctttgtatgatcagc 379
Query: 180 ctagctttgcctctcttttatgttttctgtgaggaatgaagtcatacaaacaaaaataac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctagctttgcctctcttttatgttttctgtgaggaatgaagtcatacaaacaaaaataac 439
Query: 240 accatgttcaagcttgctgtgtgtcatccagatcacgaaggaagtccagttgagcaggcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 accatgttcaagcttgctgtgtgtcatccagatcacgaaggaagtccagttgagcaggcg 499
Query: 300 ccaaggaacgctggagcagtcacttgtcgacatggaggttatctgtcctgctgtgtcctt 359
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 500 ccaaggaacgctggagcagtcactcgtcgacatggaggttatctgtcctgctgtgtcctt 559
Query: 360 ctcctggttccacagcagcactctggctcactggagtcttcactgataaaatccatccct 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 ctcctggttccacagcagcactctggctcactggagtcttcgctgataaaatccatccct 619
Query: 420 cttctaatccctctcataaaaatgggcagttcagcaagcaagtgctagaacaaagtcctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttctaatccctctcataaaaatgggcagttcagcaagcaagtgctagaacaaagtcctg 679
Query: 480 aaaagacaaactagtccctccatcctttccctgagataggagtagccactacacagtgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaagacaaactagtccctccatcctttccctgagataggagtagccactacacagtgaa 739
Query: 540 gaaggagtgcagcctacctgctctgggtgggaggagagaggctactgatgggcaacatgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaaggagtgcagcctacctgctctgggtgggaggagagaggctactgatgggcaacatgg 799
Query: 600 ggctgtggccagttgttacttaactttaaaatgagtgtaattagggctg 648
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ggctgtggccagttgttacttaactttaaaatgagtgtaattagggctg 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
