CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAATATTTCTACCAAGATATAAAGACGGTGCATCACATCAATGAC
CAGAACCAGAAGATATCTCCAATAAATAAATAAAAGTGCTAATAAAGCAC
TTTTATCTTGGGATTGACCAACATCAGTCTTATAGGGCTAAAGCAGTCCC
AATAGGAGGAAATAAATGTCTGGTACTTTAAACCTAGAAAACTGACTACT
TATTGCTGGGAATGGCATGCACTTTAAAGAATAGCCTACTACTGTCATTG
CCCTAAGTAATTATAACTTCAACTATAATCTATTATACAAATTTTAATCC
TGTATGTTTATACCTAAGGATAAATGCAGCCTTACCTTGACCTGTCCAGC
AGGTCCAGTTATTTGAGGGCCTCGAGGGGACCTTCTCCTAAGAACCAAAT
GGGGGGAGGGAGAGACAGAAACCGAGTGTGAGAACGACATGGAAACAGTC
TGAGAAGCATCAAGGTCTCTCTGTATTCAGCAAGGCTCAAGGCTTAAATG
CACAAGCAAAAGAGGAAGTACTTCTCAGCAGGAGGGATGGGGCAGCAGGA
AATTTTTCTTTTGGCAACTACATGGGGAAGCAGGAACTTGGTGGTATCAG
GGTACATCTTGTGGTCAGGACATCTGGTGCTGACTTAGGCCTGGAACATT
CTGTGGNTGTTCTCAGAAAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAACTCTCTACCCCATTT
TTAAATTGGGTTATTTGGGTTTTCAGAGTCTATCTTCTTGAGTTCTTTCT
TTATTTCAGATATTACCCCCCTACGGAATGTAAGGCTAGTGAAGGTCTTA
AAACTTAAAATATTAGGCATATCCAAAATCCAAAAACCCAATATCTAAAT
TGGAAGATTAAACCAACATTTATCCAAAAATGATATGTACACTCAAACTG
TTTTAAACAGCAATTACCACACTTAGTAAGTCTCAACTAGATATTATTAG
CTGTGGTCTGTTAGATCTATATTTCATTATAGACTGAACCTACACACTAA
ACAAAGTATAGATAAGCAAAGCTTATAAGGATCACTCATCTTCATAAAAA
CATTCAATGTAATGTTATATATAGACTGGGCATATTGTATTTTTGTGTTT
ATGAATATATATACAGATACAGATACAGATACAGATACAGATACAGATAC
AGGTACAGGTACAGGTACAGGTACAGGTACAGGTATAGGTACAGATATAG
ATAGGTGTGTGTGTGTGTATGTATGNATGNNNNNNNNNNNTNNNTNNTTC
TTNNTTNTTTTNTTTTTTTTTTTTTTATTTTTTTTTTTTTNTTTTTNNTT
TTTTTTTTTTTTTTTNTTTTT

Query= MSMg01no235_j13.g1 MSMg01no235_j13.g1 CHROMAT_FILE:
MSMg01no235_j13.g1 PHD_FILE: MSMg01no235_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:58 2005
         (550 letters)



>mm_chr15_21245853_21246802
          Length = 950

 Score =  978 bits (506), Expect = 0.0
 Identities = 529/548 (96%), Gaps = 18/548 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgtttaactctctaccccatttttaaattgggttatttgggttttcagagtctatctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tctgtttaactctctaccccatttttaaattgggttatttgggttttcagagtctatctt 673

                                                                       
Query: 61  cttgagttctttctttatttcagatattacccccctacggaatgtaaggctagtgaaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cttgagttctttctttatttcagatattacccccctacggaatgtaaggctagtgaaggt 613

                                                                       
Query: 121 cttaaaacttaaaatattaggcatatccaaaatccaaaaacccaatatctaaattggaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cttaaaacttaaaatattaggcatatccaaaatccaaaaacccaatatctaaattggaag 553

                                                                       
Query: 181 attaaaccaacatttatccaaaaatgatatgtacactcaaactgttttaaacagcaatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 attaaaccaacatttatccaaaaatgatatgtacactcaaactgttttaaacagcaatta 493

                                                                       
Query: 241 ccacacttagtaagtctcaactagatattattagctgtggtctgttagatctatatttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ccacacttagtaagtctcaactagatattattagctgtggtctgttagatctatatttca 433

                                                                       
Query: 301 ttatagactgaacctacacactaaacaaagtatagataagcaaagcttataaggatcact 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 ttatagactgaacctacacactaaacaaagtatagataagcaaagtttataaggatcact 373

                                                                       
Query: 361 catcttcataaaaacattcaatgtaatgttatatatagactgggcatattgtatttttgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 catcttcataaaaacattcaatgtaatgttatatatagactgggcatattgtatttttgt 313

                                                                       
Query: 421 gtttatgaatatatatacagatacagatacagatacagatacagatacagatacaggtac 480
           ||||||||||||||||||||||||||||||||||||||||||||                
Sbjct: 312 gtttatgaatatatatacagatacagatacagatacagatacag---------------- 269

                                                                       
Query: 481 aggtacaggtacaggtacaggtacaggtataggtacagatatagataggtgtgtgtgtgt 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 --gtacaggtacaggtacaggtacaggtataggtacagatatagataggtgtgtgtgtgt 211

                   
Query: 541 gtatgtat 548
           ||||||||
Sbjct: 210 gtatgtat 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)