Query= MSMg01no261_j05.b1 MSMg01no261_j05.b1 CHROMAT_FILE:
MSMg01no261_j05.b1 PHD_FILE: MSMg01no261_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:00 2005
(274 letters)
>mm_chr15_97528816_97529489
Length = 674
Score = 484 bits (250), Expect = e-141
Identities = 262/266 (98%)
Strand = Plus / Minus
Query: 9 gaattctaaagttctcagccttgttctagagatcttcacacttaagtcgtattggctgtc 68
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 474 gaattctaaagttctcagccttgttctagagatcgtcacacttaagtcgtgttggctgtc 415
Query: 69 tccttactggggaggccgtggagccaggagcctattctagagccacgttaattacctggt 128
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 414 tccttactggggagggcgtggagccaggagcctgttctagagccacgttaattacctggt 355
Query: 129 tctgatctgtgatgagctctttaagctttttgtagctcactttcttagctgttcaaaggg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tctgatctgtgatgagctctttaagctttttgtagctcactttcttagctgttcaaaggg 295
Query: 189 aacagagcgttgctaaacctcagcagttgatgtgttaggtgatccaagtgcttggacagc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aacagagcgttgctaaacctcagcagttgatgtgttaggtgatccaagtgcttggacagc 235
Query: 249 acccgcgattagtcttgcttttagtg 274
||||||||||||||||||||||||||
Sbjct: 234 acccgcgattagtcttgcttttagtg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no261_j05.g1 MSMg01no261_j05.g1 CHROMAT_FILE:
MSMg01no261_j05.g1 PHD_FILE: MSMg01no261_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:00 2005
(326 letters)
>mm_chr15_97368335_97369057
Length = 723
Score = 592 bits (306), Expect = e-173
Identities = 320/326 (98%), Gaps = 3/326 (0%)
Strand = Plus / Plus
Query: 1 tcactccatcgagctgacataaaatacgttcactaaaggattttctagaaagctcacaga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tcactccatcgagctgacataaaatacgttcactaaaggatattctagaaagctcacaga 260
Query: 61 atcactcaacatcctagaggaaccgtttcctaaattaccaattagagtcctagctccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcactcaacatcctagaggaaccgtttcctaaattaccaattagagtcctagctccagc 320
Query: 121 ccacaggcctggcaggcagtgatgtcgctgctattattaccaactctagaatcaccccac 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ccacaggcctggcaggcagtgatgtcgctgc---tattaccaactctagaatcaccccac 377
Query: 181 ccttgctatgacagagggcacacctctagcacttccagccctggaaattccctgtgttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccttgctatgacagagggcacacctctagcacttccagccctggaaattccctgtgttgg 437
Query: 241 ccactcctaaccagcatcttgtgtgccgccatgttctgccagtctctgaaaaagcttgcc 300
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 438 ccactcctaaccagcaacttgtgtgccgccatgttctgccagtctctcaaaaagcttgcc 497
Query: 301 tctaaatcacagccccatgaatctgg 326
||||||||||||||||||||||||||
Sbjct: 498 tctaaatcacagccccatgaatctgg 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 723
Length adjustment: 9
Effective length of query: 317
Effective length of database: 714
Effective search space: 226338
Effective search space used: 226338
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
