Query= MSMg01no264_n09.b1 MSMg01no264_n09.b1 CHROMAT_FILE:
MSMg01no264_n09.b1 PHD_FILE: MSMg01no264_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:08 2005
(353 letters)
>mm_chr15_64243869_64244620
Length = 752
Score = 652 bits (337), Expect = 0.0
Identities = 349/353 (98%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 1 cactacattccttccccagagtcacgtgcacaggtacaccttgaaaagcttgcctttcct 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 552 cactacattccttccccagagtcacgtgcacaggtacaccttgggaagcttgcctttcct 493
Query: 61 cctggcatcctctcctcccctgaccctgctaactccccatcccttattgtggagaccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cctggcatcctctcctcccctgaccctgctaactccccatcccttattgtggagaccagc 433
Query: 121 ctagcttcccccatgtcctttttcctttccctttgagtggcaggcctttcctcttaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctagcttcccccatgtcctttttcctttccctttgagtggcaggcctttcctcttaccct 373
Query: 181 cctgacattctaccttgtagaacccattgtctcatttttgtaccattcatagagtttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cctgacattctaccttgtagaacccattgtctcatttttgtaccattcatagagtttaag 313
Query: 241 gaaccattgcttgaaaaaccaaatcctctccagggagataaagggctctatatgagccag 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 312 gaaccattgcttgaaaaaccaaatcctctccagggagataaa-ggctctatatgagccag 254
Query: 301 ctgtgagtatcctctggctaagaaatcttgcctgggtcaagcgtgtctatgaa 353
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 253 ctgtgagtatcctctggctaagaaatcttgccttggtcaagcgtgtctatgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 752
Length adjustment: 9
Effective length of query: 344
Effective length of database: 743
Effective search space: 255592
Effective search space used: 255592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_n09.g1 MSMg01no264_n09.g1 CHROMAT_FILE:
MSMg01no264_n09.g1 PHD_FILE: MSMg01no264_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:08 2005
(233 letters)
>mm_chr15_64083819_64084451
Length = 633
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%)
Strand = Plus / Plus
Query: 1 tttctgaatcctgggattataagtatgtgccacagaacttagctttaaactgtctcgtca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tttctgaatcctgggattataagtatgtgccacagaacttagctttaaactgtctcttca 260
Query: 61 cttacaaaatggactttagattacattttggtcctgggatagctgtgagactaatggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttacaaaatggactttagattacattttggtcctgggatagctgtgagactaatggttt 320
Query: 121 caaactgaagtgtcagcttagaatatttcccctacactacttaagacagatttgggtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaactgaagtgtcagcttagaatatttcccctacactacttaagacagatttgggtcag 380
Query: 181 agcttaacaatctccttattagtgatttttttgaatgggatgactcattgtta 233
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttaacaatctccacattagtgatttttttgaatgggatgactcattgtta 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
