Query= MSMg01no270_m05.b1 MSMg01no270_m05.b1 CHROMAT_FILE:
MSMg01no270_m05.b1 PHD_FILE: MSMg01no270_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:30 2005
(320 letters)
>mm_chr15_86550708_86551427
Length = 720
Score = 240 bits (124), Expect = 9e-68
Identities = 130/132 (98%)
Strand = Plus / Minus
Query: 189 ctgatcttgagacagggctgtggccaggctgagcaatacagactaggcccagcattccca 248
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 520 ctgatcttgagacagggctgtggccaggctgagcaatacagaccaggcccagcattccca 461
Query: 249 gagctgatattccatagatagagctagcataagccaatgcatgatgactagaaggctctt 308
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gagctgatattccataggtagagctagcataagccaatgcatgatgactagaaggctctt 401
Query: 309 tcagagatcagt 320
||||||||||||
Sbjct: 400 tcagagatcagt 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_m05.g1 MSMg01no270_m05.g1 CHROMAT_FILE:
MSMg01no270_m05.g1 PHD_FILE: MSMg01no270_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:30 2005
(351 letters)
>mm_chr15_86421505_86422255
Length = 751
Score = 652 bits (337), Expect = 0.0
Identities = 347/351 (98%), Gaps = 2/351 (0%)
Strand = Plus / Plus
Query: 1 atgggatcagtgggataggtataagtgcatataggaatatgagcttctatatgctcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggatcagtgggataggtataagtgcatataggaatatgagcttctatatgctcacac 260
Query: 61 atcaacacacagttatacattcatacacttcagtccatgatggcatatgtcacctattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaacacacagttatacattcatacacttcagtccatgatggcatatgtcacctattga 320
Query: 121 catcttgtcatgtgggactcaccagagatgaccactcagacacggtgtatggccactgaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 catcttgtcatgtgggactcaccagaggtgaccactcagacacggtgtatggccactgaa 380
Query: 181 agtctttattccagctgtctatagccacatccaagcatttggggacctgggcctgagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtctttattccagctgtctatagccacatccaagcatttggggacctgggcctgagtgt 440
Query: 241 ccagagcacatgagatttttttttttttaaagacagaaagtacatccttgcctctcagtc 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 ccagagcacatgagattttttttttt--aaagacagaaagtacatccttgcctctcagtc 498
Query: 301 tgcagctgcaggggtcttcgagaagcaagcagttttggcggaaactaagag 351
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 499 tgcagctgcaggggtcttcgagaagcaagcagttttggcagaaactaagag 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
