Query= MSMg01no273_n10.b1 MSMg01no273_n10.b1 CHROMAT_FILE:
MSMg01no273_n10.b1 PHD_FILE: MSMg01no273_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:17 2005
(319 letters)
>mm_chr15_89365760_89366478
Length = 719
Score = 516 bits (267), Expect = e-151
Identities = 296/315 (93%), Gaps = 16/315 (5%)
Strand = Plus / Minus
Query: 4 ggaattcctatcaagtacatgctgaggtctccgtgtttgtcctcaggtcccctaactggt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggaattcctatcaagtagatgctgaggtctccgtgtttgtcctcaggtcccctaactggt 286
Query: 64 ccttcatggccatctcatcagcttcctaagctgattctgggtggtctcagcctgatctcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccttcatggccatctcatcagcttcctaagctgattctgggtggtctcagcctgatctcc 226
Query: 124 tcgctcactgctatggctttgctttttttttttttttttttttttttttagaaagtcctg 183
|||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 225 tcgctcactgctatggctttgc------------tttttttttttttttagtaagtcctg 178
Query: 184 gattctgtgtctccaagccacagactcttctgtgtgcagctttcttgtttgtttgtttgt 243
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 177 gattctgtgtctccaagccacagactcttctgtgtgcagctttc----ttgtttgtttgt 122
Query: 244 ttgtttgtttgtttgtttcaataagttaaggaccatcgcaagcttccttgctgctgttgt 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 ttgtttgtttgtttgtttcaataagttaaggaccatcgcaaacttccttgctgctgttgt 62
Query: 304 tcgcactatcctgct 318
|||||||||||||||
Sbjct: 61 tcgcactatcctgct 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_n10.g1 MSMg01no273_n10.g1 CHROMAT_FILE:
MSMg01no273_n10.g1 PHD_FILE: MSMg01no273_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:17 2005
(566 letters)
>mm_chr15_89307799_89308766
Length = 968
Score = 1029 bits (532), Expect = 0.0
Identities = 554/562 (98%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 5 gatgaaatctgcaagaaactgcaggaggaaagttcgaaactgcagacaccccagagatgg 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gatgaaatctgcaagaaactgcaggaggaaagttcgaaactgcagagaccccagagatgg 264
Query: 65 cacaggaaggagctgggtctgactgaggctactgcatacctcatgtgaagtggggggtgg 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 cacaggaaggagctgggtctgactgaggctactgcacacctcatgtgaagtggggggtgg 324
Query: 125 ctgggggcagggggggg--agcaatcttcagttagtggctctcttagtgtcacattccag 182
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgggggcgggggggggggagcaatcttcagttagtggctctcttagtgtcacattccag 384
Query: 183 cacggtttctgggcttgtgcacgggtgggggttgccggtagtccttctatttagagtcag 242
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacggtttctggacttgtgcacgggtgggggttgccggtagtccttctatttagagtcag 444
Query: 243 gacagaaagctcttctgtggcccagaaatctttgaaactgtatttggatctctcccagct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gacagaaagctcttctgtggcccagaaatctttgaaactgtatttggatctctcccagct 504
Query: 303 ggcgcccactgtgaattgtaatttgaaaggaatcaaccagaagcactttctttccgttgc 362
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggtggccactgtgaattgtaatttgaaaggaatcaaccagaagcactttctttccgttgc 564
Query: 363 tagctggggaactaccccaggacctgcgcattattctctggagagcccgagtggggttgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagctggggaactaccccaggacctgcgcattattctctggagagcccgagtggggttgc 624
Query: 423 gatgttatgcaaatcgaggtacgtttcccctgggttcttgggggactcaggtgtgtgtac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gatgttatgcaaatcgaggtacgtttcccctgggttcttgggggactcaggtgtgtgtac 684
Query: 483 acgtgaaggttgcttgggctcagctctgacctagagctgtggaaaacttggaaagaggta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acgtgaaggttgcttgggctcagctctgacctagagctgtggaaaacttggaaagaggta 744
Query: 543 tctgcctgccgccagctctgtt 564
||||||||||||||||||||||
Sbjct: 745 tctgcctgccgccagctctgtt 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 968
Length adjustment: 10
Effective length of query: 556
Effective length of database: 958
Effective search space: 532648
Effective search space used: 532648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
