Query= MSMg01no274_c15.b1 MSMg01no274_c15.b1 CHROMAT_FILE:
MSMg01no274_c15.b1 PHD_FILE: MSMg01no274_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:40 2005
(684 letters)
>mm_chr15_26260330_26261413
Length = 1084
Score = 582 bits (301), Expect = e-170
Identities = 325/333 (97%), Gaps = 2/333 (0%)
Strand = Plus / Minus
Query: 4 ggaattctagtc-tttctcatcccatcaccttttctcaactccacctccgctgatgaccc 62
|||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 332 ggaattctagtcattt-tcatcccatcaccttttctcaactctgcctccgctgatgaccc 274
Query: 63 ccctcttctacctctgtgtcttctttgtgtgtggaacccactgaatgtatgagttgctta 122
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 273 ccctcttctacttctgtgtcttctttgtgtgtgggacccactgaatgtatgagttgctta 214
Query: 123 caccaggatctgtttgtttggatgtgaccctaaaagcacaggcaacaaaaataaagacat 182
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caccaggatcggtttgtttggatgtgaccctaaaagcacaggcaacaaaaataaagacat 154
Query: 183 aaataataactatattgaaatttcaaaggtcctgtgtagcaaatgaaactatcatccgga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aaataataactatattgaaatttcaaaggtcctgtgtagcaaatgaaactatcatccgga 94
Query: 243 taaagagacaacctatagaatgagagaaaatatttttaatctgtgcattcacacaggacc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 taaagagacaacctatagaatgagagaaaatatttttaatctgtgcattcacacaggacc 34
Query: 303 ataccaaggatataacacctgcttttcaaagac 335
|||||||||| ||||||||||||||||||||||
Sbjct: 33 ataccaaggaaataacacctgcttttcaaagac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_c15.g1 MSMg01no274_c15.g1 CHROMAT_FILE:
MSMg01no274_c15.g1 PHD_FILE: MSMg01no274_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:40 2005
(345 letters)
>mm_chr15_26083468_26084212
Length = 745
Score = 629 bits (325), Expect = 0.0
Identities = 340/345 (98%)
Strand = Plus / Plus
Query: 1 gactatacaaaaactctatgtaacagttaaattagaattttttttctagttggaatattt 60
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 gactatacaaaaaatctatgtaacagttaaattagatttttttttctagttggaatattt 260
Query: 61 gtgattagaatgtttagacgagtaggaggattccatgcaagacagaatggaaaacgcaca 120
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgattagaatgtttagatgaataggaggattccatgcaagacagaatggaaaacgcaca 320
Query: 121 gcaaatctgccagattaagggcaatgtggtgaaggtgttgacaggtgcttgctgcgtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaatctgccagattaagggcaatgtggtgaaggtgttgacaggtgcttgctgcgtaca 380
Query: 181 cacgagatcctgagttcggatcccaccactcgtgtaaaacactgggcatggttatacacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacgagatcctgagttcggatcccaccactcgtgtaaaacactgggcatggttatacacc 440
Query: 241 tctgtaacccaagtgctatggaggctggaggctggattgatggggtttgcaggctatcag 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tctgtaacccaagtgctatggaggctggaggcaggattgatggggtttgcaggctatcag 500
Query: 301 cttctttccaggtttagtgagaggatctgtctcgagggaatgagc 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttctttccaggtttagtgagaggatctgtctcgagggaatgagc 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
