Query= MSMg01no275_g22.b1 MSMg01no275_g22.b1 CHROMAT_FILE:
MSMg01no275_g22.b1 PHD_FILE: MSMg01no275_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:10 2005
(709 letters)
>mm_chr15_92349835_92350944
Length = 1110
Score = 1334 bits (690), Expect = 0.0
Identities = 702/706 (99%), Gaps = 1/706 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcgtttatacacttttgcctctgttcagagattgttcgtaaagggcaaaatca 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gaattcatcgtttatacatttttgcctctgttcagagattgttcgtaaagggcaaaatca 806
Query: 65 taagctgaaaactgtgacccagatctgtagaagagcatgcaagcctttcatgcaactgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taagctgaaaactgtgacccagatctgtagaagagcatgcaagcctttcatgcaactgaa 746
Query: 125 gatggcacagtgcacggggataagccagaggagctctgcattaaagccaggcaaagacct 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gatggcacagtgcacagggataagccagaggagctctgcattaaagccaggcaaagacct 686
Query: 185 atggaacactcttccaaagtccttaacatagtgtgcatgaaagagccttcacatgcatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atggaacactcttccaaagtccttaacatagtgtgcatgaaagagccttcacatgcatca 626
Query: 245 taatgcatcgacacacatatgcacatttgcatgcatacttacatctagatagtaaggact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taatgcatcgacacacatatgcacatttgcatgcatacttacatctagatagtaaggact 566
Query: 305 gtgtatttttttctgtgagataataga-tttttttttttgtcttgtagttttattttctt 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtatttttttctgtgagataatagattttttttttttgtcttgtagttttattttctt 506
Query: 364 gacacggctatagtcagttacaaggtcttgtagctaaatgttgatgaagctccttttaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gacacggctatagtcagttacaaggtcttgtagctaaatgttgatgaagctccttttaat 446
Query: 424 tttccactaacatgacaattaggctttattaaacttatgaaaaatatacaacaggtagtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttccactaacatgacaattaggctttattaaacttatgaaaaatatacaacaggtagtt 386
Query: 484 ggggatgttttgttttgtcttgtcttgatcatactaaacaagtggttttccacttggctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggggatgttttgttttgtcttgtcttgatcatactaaacaagtggttttccacttggctg 326
Query: 544 tatcttagggatcctagtagtgtttccaacagtaaagagatgtattctttatgcactgca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatcttagggatcctagtagtgtttccaacagtaaagagatgtattctttatgcactgca 266
Query: 604 tgcagagatagagtgcctgttgtgtgacctatgctttccaaaatgcttcccactaagtag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcagagatagagtgcctgttgtgtgacctatgctttccaaaatgcttcccactaagtag 206
Query: 664 gtgtcttagtcaaggtttctattcctgcacaaacatcatgaccaag 709
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gtgtcttagtcagggtttctattcctgcacaaacatcatgaccaag 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1110
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1100
Effective search space: 768900
Effective search space used: 768900
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no275_g22.g1 MSMg01no275_g22.g1 CHROMAT_FILE:
MSMg01no275_g22.g1 PHD_FILE: MSMg01no275_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:10 2005
(292 letters)
>mm_chr15_92296342_92297033
Length = 692
Score = 429 bits (222), Expect = e-125
Identities = 270/300 (90%), Gaps = 30/300 (10%)
Strand = Plus / Plus
Query: 1 ttatcagtgcagtgtattgttgttccaaattttaaattttgaccttattttttgatatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatcagtgcagtgtattgttgttccaaattttaaattttgaccttattttttgatatca 260
Query: 61 tctttgttctgtgcattcttagattatagatgattgcagggaaggctccctaatctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttgttctgtgcattcttagattatagatgattgcagggaaggctccctaatctcctt 320
Query: 121 cgcatgtgtgatggttag--------gaatatttctgtttgtttcaaaagaagcaaaaaa 172
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cgcatgtgtgatggttagatggttaggaatatttctgtttgtttcaaaagaagcaaaaaa 380
Query: 173 caaaaaaacaaaaacaaaaacaaaaacaaaaacaaaaaacaaacaaacaaacaaacaaaa 232
||||||| |||||||||| ||||| |||||| |||||| |||||||
Sbjct: 381 -aaaaaaa-aaaaacaaaa-caaaa-caaaaa-aaaaaa--------------aacaaaa 421
Query: 233 aaaaaaaactgtgagacaggaaacagacatcaaacctaccagagactgtccccagtcctt 292
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 422 aaaaaa--ctgtgagacaggaaacagacatcaaacctac-agagactgtccccagtcctt 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
