Query= MSMg01no275_l08.b1 MSMg01no275_l08.b1 CHROMAT_FILE:
MSMg01no275_l08.b1 PHD_FILE: MSMg01no275_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:29 2005
(315 letters)
>mm_chr15_47814697_47815411
Length = 715
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttagggcttttgaaacctcaaatgtataccccatacaacaaagccacaccctc 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 658 ggaattcttagggcttttgaaacctcaaatgtataccccatacaacaaagccacaccccc 599
Query: 64 tacaccctcctaaacacttctaccaactaggggcttagaattccaaattatgcgcttata 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tacaccctcctaaacagttctaccaactaggggcttagaattccaaattatgcgcttata 539
Query: 124 atgaccatcttcatgcaaatcactgtataaactataatagttactctggaataaaagagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atgaccatcttcatgcaaatcactgtataaactataatagttactctggaataaaagagg 479
Query: 184 ttcacagtataatttgagtacataagtataaaaatcggaaagaaccaaaaactgacaatt 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 478 ttcacagtataatttgagtacataagtataaaaatcagaaagaaccaaaaactgacaatt 419
Query: 244 tatatatcatttcaagtggaagatgaagtatgtgaatacacataaggtatatagagaaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tatatatcatttcaagtggaagatgaagtatgtgaatacacataaggtatatagagaaag 359
Query: 304 ttacctgatgat 315
||||||||||||
Sbjct: 358 ttacctgatgat 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_l08.g1 MSMg01no275_l08.g1 CHROMAT_FILE:
MSMg01no275_l08.g1 PHD_FILE: MSMg01no275_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:29 2005
(284 letters)
>mm_chr15_47668470_47669153
Length = 684
Score = 497 bits (257), Expect = e-145
Identities = 278/285 (97%), Gaps = 2/285 (0%)
Strand = Plus / Plus
Query: 1 acttaccaatgtaacactgatgttcaaactatgactgaactatctcactagatgtttttt 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttaccaatgtaatactgatgttcaaactatgactgaactatctcactagatgttttt- 259
Query: 61 atttagttaattgtttataagtccgaattttgctatttatcccaggttcactgagaacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atttagttaattgtttataagtccgaattttgctatttatcccaggttcactgagaacgc 319
Query: 121 acatacctcagtctcctaaattttgagattgcaacctggtagaagaatttgattctttct 180
|||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 320 acatacctcagtgtcctaaattgtgagattgcaacctggtagtagaatttgattctttct 379
Query: 181 ttcttgcacagacaaatttgaagctaagtatgaaatatcctaatttaatcagtaagaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcttgcacagacaaatttgaagctaagtatgaaatatcctaatttaatcagtaagaaaa 439
Query: 241 aaa-taagcttaaagagatcaaataacttggataaatccataatc 284
||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 aaaataagcttaaagagatcaagtaacttggataaatccataatc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
