Query= MSMg01no276_p03.b1 MSMg01no276_p03.b1 CHROMAT_FILE:
MSMg01no276_p03.b1 PHD_FILE: MSMg01no276_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:58 2005
(319 letters)
>mm_chr15_96966757_96967476
Length = 720
Score = 514 bits (266), Expect = e-150
Identities = 307/328 (93%), Gaps = 13/328 (3%)
Strand = Plus / Plus
Query: 5 gaattctcccggttctcactctctcccagagttcccctctcttccaggaagtcccacctt 64
|||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gaatcctcccgggcctgactctctcccagagttcccctctcttccaggaagtcccacctt 252
Query: 65 ctatttcctgtctttcttacaggccgtcagctttttgataaaccaatcagaaggtgagag 124
||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 253 ctatttcctgtttttgttacaggccgtcagctttttgataaaccagtcagaaggtgagag 312
Query: 125 agggagggtttacaaaatatgatgcagccatattaataacgacaccaaagtcagcttgta 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agggtgggtttacaaaatatgatgcagccatattaataacgacaccaaagtcagcttgta 372
Query: 185 cttggccctctgccaacagagagatcagcatttga------------cggtgtttacacg 232
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 373 cttggccctctgccaacagagagatcagcatttgaataatacaaagacggtgtttacacg 432
Query: 233 gtgcacaatattatcccaacagtgagttctcccaaca-ctccagtaatggctctagttag 291
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 433 gtgcacaatattatcccaacagtgagttctcccaacaactccagtaatggctctagttag 492
Query: 292 acagtcgtcttcttccttgaccactgga 319
||||||||||||||||||||||||||||
Sbjct: 493 acagtcgtcttcttccttgaccactgga 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_p03.g1 MSMg01no276_p03.g1 CHROMAT_FILE:
MSMg01no276_p03.g1 PHD_FILE: MSMg01no276_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:58 2005
(292 letters)
>mm_chr15_97137948_97138639
Length = 692
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%)
Strand = Plus / Minus
Query: 1 catctgttgagacgaagggatgtgaataattgatttcaaccatcacaaacctttgacaga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 catctgttgagacgaaaggatgtgaataattgatttcaaccatcacaaacctttgacaga 431
Query: 61 tggacacctcactttttttcttaatttacaaagatctcattcaaatcacttaaaagtgaa 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tggacacctcgctttttttcttaatttacaaagatctcattcaaatcacttaaaagtgaa 371
Query: 121 caaatcaatagaaaaaaaagggacaagaggtattgatcagcggctccatgtactaagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caaatcaatagaaaaaaaagggacaagaggtattgatcagcggctccatgtactaagtaa 311
Query: 181 aaatagcaaatagatgagagatgcttttagtagaaagaaagtggataggaaaacatgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaatagcaaatagatgagagatgcttttagtagaaagaaagtggataggaaaacatgagg 251
Query: 241 tttctatcagcttggcaagaagaatgaggaagaggaagaagatgaaagaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttctatcagcttggcaagaagaatgaggaagaggaagaagatgaaagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
