Query= MSMg01no277_l16.b1 MSMg01no277_l16.b1 CHROMAT_FILE:
MSMg01no277_l16.b1 PHD_FILE: MSMg01no277_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:55 2005
(246 letters)
>mm_chr15_66627903_66628549
Length = 647
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 1 gagaaccctaacatagagtcagctccattttgtttcccacacatatgcctacagtgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 446 gagaaccctaacatagagtcagctccattttgtttcccacacatatgcctagagtgtctg 387
Query: 61 gcaagctccaggctgtgcccagggctgcctgacactgaata-cccccgtgctcagttttc 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 386 gcaagctccaggctgtgcccagggctgcctgacactgaataccccccgtgctcagttttc 327
Query: 120 taggggctcacagccaggtaagggcatcctctgacagtcatatggatgtgccagggcaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taggggctcacagccaggtaagggcatcctctgacagtcatatggatgtgccagggcaac 267
Query: 180 tttcagacactgcttcaaaggaaaacttcaagtaaaggctagtaaagcacagagtctctt 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 266 tttcagacactgcttcaaaggaaaacttcaagtaaaggctagcaaagcacagagtctctt 207
Query: 240 ccagag 245
||||||
Sbjct: 206 ccagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_l16.g1 MSMg01no277_l16.g1 CHROMAT_FILE:
MSMg01no277_l16.g1 PHD_FILE: MSMg01no277_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:55 2005
(632 letters)
>mm_chr15_66465409_66466441
Length = 1033
Score = 1125 bits (582), Expect = 0.0
Identities = 621/634 (97%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 1 caggacagccagacaggactacacagagaaattctgtcttgttggtcaggggagtaagga 60
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 201 caggacagccagacaggactacacagagaaattctgtcttgggggtgaggggagtaagga 260
Query: 61 atgaataaccctttggataatgacaagctctgtatacctggttcacatcctactatt-aa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 atgaataaccctttggataatgacaagctctgtatacctggttcacatcctactatttaa 320
Query: 120 aaaaaaaaattagagctagtgttt-gtgcacatagctaactgtagctgataagtgattct 178
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaaaaattagagctagtgttttgtgcacatagctaactgtagctgataagtgattct 380
Query: 179 gctttcaatgtctgataatagtgtgagaggaattcattctatgagggtgtgttcttaact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttcaatgtctgataatagtgtgagaggaattcattctatgagggtgtgttcttaact 440
Query: 239 accataatatggactcacaaagagtgaggaggcagcagatgcaggattttctttgctgct 298
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 accataagatggactcacaaagagtgaggaggcagcagatgcaggatcacctttgctgct 500
Query: 299 gtgcctcataacactttataacttcagacagtttttccttaaggaaagtctaggtccttt 358
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgcctcataacactttataacttgagacagtttttccttaaggaaagtctaggtccttc 560
Query: 359 taagtaacatatctggatagttttgaggccttttgctcattttcttctaatgccagacca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagtaacatatctggatagttttgaggccttttgctcattttcttctaatgccagacca 620
Query: 419 tagttgtttaaagattaaaggagagagcctttttttttaatgtaatgtaaatgttctgct 478
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 tagttgcttaaagattaaaggagagagc-tttttttttaatgtaatgtaaatgttctgct 679
Query: 479 cattcttcccaggatttgccccatctgcattctgaggcctcatcttttcctgtgagtcct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cattcttcccaggatttgccccatctgcattctgaggcctcatcttttcctgtgagtcct 739
Query: 539 aagtctggtgtgcctttgagttgctcttctgcttactctcttgtcctagccagacagctt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aagtctggtgtgcctttgagttgctcttctgcttactctcttgtcctagccagacagctt 799
Query: 599 tatttcatgggaaaatttctgtaccttttcattt 632
||||||||||||||||||||||||||||||||||
Sbjct: 800 tatttcatgggaaaatttctgtaccttttcattt 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
