Query= MSMg01no277_o03.b1 MSMg01no277_o03.b1 CHROMAT_FILE:
MSMg01no277_o03.b1 PHD_FILE: MSMg01no277_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:05 2005
(236 letters)
>mm_chr15_87965428_87966063
Length = 636
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 1 ccaaacaccaggttctagggaagaaaaatgaaggtgacgaagactttcataatacagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ccaaacaccaggttctagggaagaaaaatgaaggtgacgaagactttcataatacagcta 377
Query: 61 ccaagttctcttgaggcaatcaaagaggcccggtaaacatgggtggaaacaaccttcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccaagttctcttgaggcaatcaaagaggcccggtaaacatgggtggaaacaaccttcctg 317
Query: 121 tgtgggcgtgcttgattttcagcatcagtggaaaccttcctagttcccccaaggaatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgtgggcgtgcttgattttcagcatcagtggaaaccttcctagttcccccaaggaatggg 257
Query: 181 caggcagatgacaggtctataaggacaaagcggaggagacacctgtagctatcaag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caggcagatgacaggtctataaggacaaagcggaggagacacctgtagctatcaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_o03.g1 MSMg01no277_o03.g1 CHROMAT_FILE:
MSMg01no277_o03.g1 PHD_FILE: MSMg01no277_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:05 2005
(289 letters)
>mm_chr15_87811503_87812194
Length = 692
Score = 449 bits (232), Expect = e-130
Identities = 277/294 (94%), Gaps = 7/294 (2%)
Strand = Plus / Plus
Query: 1 cagctctgaacgtctatctgaagcccagctggcccacgcgtccttggacccttcacaaag 60
|||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 201 cagctctgaacgtctatctgaagcccagctggcccatgcatccatggacccttcacaaag 260
Query: 61 gatgtatctgtgccctgtggacctacaccagg--acaaacaggagaatgacctactgaag 118
||| ||||||||||| ||||||||| |||| | | ||| ||||||||||||||||||||
Sbjct: 261 gatatatctgtgccccgtggacctataccatgtta-aaa-aggagaatgacctactgaag 318
Query: 119 caataag---attagattagtaggtatgtggtgtgaacatagggctttacatcagtggtc 175
||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |
Sbjct: 319 caataagtagattagattagtaggtatgtggtgtgaacatagggccttacatcaggggcc 378
Query: 176 ctggtgatcctggtgatgtgagtgagctgacatgttgattactgtggacctctccttgac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctggtgatcctggtgatgtgagtgagctgacatgttgattactgtggacctctccttgac 438
Query: 236 tagaatctgcatcttctgtaggtgggtggaattgggagttggttttgtggaact 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tagaatctgcatcttctgtaggtgggtggaattgggagttggttttgtggaact 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 692
Length adjustment: 9
Effective length of query: 280
Effective length of database: 683
Effective search space: 191240
Effective search space used: 191240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
