TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCATAAAGTACTCAGGCAACTCCACAGCCCATCTCACCTCTCAGTGT
CTGAAATTGGATTTGGAAAGCACGGCCAGCATGTGCTGAGAGATGCAGGG
CAGAAGAAAATGAAAATCCCCTCTGGAAGAAGCTAATGCTATCCCAGACC
TCCGGTAATTCTTCAAACAATTTTATCAAATGCAATGTTTTGCACTTCCT
AACAAAAGAACCAAGCTCAGGGCAGTTTTTTATTTGTTTGCTTCCTAGGC
AGGGTTACTCTTTATCTTTCTAACAATAGATTTTATTCCCACGGAAATTT
CTTACTCAGTCTGAGTTCCAGTCTTATTCTTACCCCTTTTCTTTTGTATA
TATTTAAATCAGAACATAAATGAATCTAATGAATTCAAAGGGTGGCCTTA
GAAGTTCCGGCAGTGTGTCAGCCTGTTGTCTAGCATAGGAAAAGGAAAAA
GAAATGCCCTTTCCTTGCAACCACAATTTTGCTACTTTGTATAGTAAAAT
GGCATTGCTGAGGGAAACACTGTTTTCCCCAACGAACACTGGCACTATTA
AAATAAATCCAGGTGAACAACTATGGTGTATTGTATTAAAATTTATTTCA
ACTAACTACTTTTAAAGTTTGCATATTGATGTTTAAGGTGAGGTCTTATG
AATTCAATATTCATGTGTATGCCCCAGATACATCA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTTAGCTTGCTTGGATATTTGCA
ATAAAATGATGAAAATCCGTCTATGCTGTAAAGTAGCATCTTGATTATTC
AGTTTGACAGGGTTACCTAAGAGATAAGCCTCTGTCGGCTTGCCCCTGAA
CTATTATCTAGATTATGTTAATTGTAATGGAAATACTCATCACCATTGTG
GGTGGTGTCATTCCCTTGGCCAGGATCCTGAGCTAAGAAAAGAGGAAAAA
TAACCTGAGCTTTAGCGTTTATTTCTGTTTCCTCAGTGTGGATGCAAAGT
GATCGGCTGCTGTCTCTTCCAGCCTCCCTCACCTCCGTGAGTTTGGAACT
TTGTCATAGAAAACTGCTTGAATATTTTAGACAGAGCTTATGGGGCCTTT
CTGCTGAGAGCTAGAAGATAAGATAGTTGAGAGAAATAAAAAGAGTAGAT
GTGGTGGTATAAATGAGAAATGTCCTCCATAATTTGGAATGTTTGATAGC
TTAGTCTCAGTGGGATATGCTGTGAGTGCAGACTTGTGTGAAGAGAGAAG
TCACTAGAGATTGCATAGAGAATTCATAGCCTTGCACCAGAGGTAGTTTT
CTCTCTATGCTTTGTACTTGTGGTTGAAGAAATGATCACTAAGACTCCTG
TTCCAGCTACCTGCTGCCATGCCTCAACCACCATTAAG

Query= MSMg01no278_b23.b1 MSMg01no278_b23.b1 CHROMAT_FILE:
MSMg01no278_b23.b1 PHD_FILE: MSMg01no278_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:22 2005
         (688 letters)



>mm_chr15_29542230_29543318
          Length = 1089

 Score = 1263 bits (653), Expect = 0.0
 Identities = 677/685 (98%), Gaps = 1/685 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccataaagtac-tcaggcaactccacagcccatctcacctctcagtgtctgaaat 63
           ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccataaaggaagtcaggcaactccacagcccatctcacctctcagtgtctgaaat 264

                                                                       
Query: 64  tggatttggaaagcacggccagcatgtgctgagagatgcagggcagaagaaaatgaaaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggatttggaaagcacggccagcatgtgctgagagatgcagggcagaagaaaatgaaaat 324

                                                                       
Query: 124 cccctctggaagaagctaatgctatcccagacctccggtaattcttcaaacaattttatc 183
           |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 325 cccctctggaagaagctaatgctaccccagacctccggtaattcttaaaacaattttatc 384

                                                                       
Query: 184 aaatgcaatgttttgcacttcctaacaaaagaaccaagctcagggcagttttttatttgt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatgcaatgttttgcacttcctaacaaaagaaccaagctcagggcagttttttatttgt 444

                                                                       
Query: 244 ttgcttcctaggcagggttactctttatctttctaacaatagattttattcccacggaaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcttcctaggcagggttactctttatctttctaacaatagattttattcccacggaaa 504

                                                                       
Query: 304 tttcttactcagtctgagttccagtcttattcttaccccttttcttttgtatatatttaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttcttactcagtctgagttccagtcttattcttaccccttttcttttgtatatatttaa 564

                                                                       
Query: 364 atcagaacataaatgaatctaatgaattcaaagggtggccttagaagttccggcagtgtg 423
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 atcagaacataaatgaatctaatgaattcaaagggtggccttagaagttctggcagtgtg 624

                                                                       
Query: 424 tcagcctgttgtctagcataggaaaaggaaaaagaaatgccctttccttgcaaccacaat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcagcctgttgtctagcataggaaaaggaaaaagaaatgccctttccttgcaaccacaat 684

                                                                       
Query: 484 tttgctactttgtatagtaaaatggcattgctgagggaaacactgttttccccaacgaac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 685 tttgctactttgtatagtaaaatggcattgctgagggaaacactgttttccccaatgaac 744

                                                                       
Query: 544 actggcactattaaaataaatccaggtgaacaactatggtgtattgtattaaaatttatt 603
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acaggcactattaaaataaatccaggtgaacaactatggtgtattgtattaaaatttatt 804

                                                                       
Query: 604 tcaactaactacttttaaagtttgcatattgatgtttaaggtgaggtcttatgaattcaa 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaactaactacttttaaagtttgcatattgatgtttaaggtgaggtcttatgaattcaa 864

                                    
Query: 664 tattcatgtgtatgccccagataca 688
           |||||||||||||||||||||||||
Sbjct: 865 tattcatgtgtatgccccagataca 889


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space:   731562
Effective search space used:   731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)