Query= MSMg01no280_h24.b1 MSMg01no280_h24.b1 CHROMAT_FILE:
MSMg01no280_h24.b1 PHD_FILE: MSMg01no280_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:21 2005
(262 letters)
>mm_chr15_62138470_62139131
Length = 662
Score = 491 bits (254), Expect = e-143
Identities = 260/262 (99%)
Strand = Plus / Plus
Query: 1 gctatgaagataaaggaaaagtactgattaattcattaggtatcttctaggaacttctgt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctatggagataaaggaaaagtactgattaattcattaggtatcttctaggaacttctgt 260
Query: 61 tctgtagtcatgcatgcaagagtgaatcttaaaatttgatccattatctaaatagcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgtagtcatgcatgcaagagtgaatcttaaaatttgatccattatctaaatagcattc 320
Query: 121 atacatttcaattggttgctatctgttagacttctttgactcacaagtcctctattagct 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacatttcaattggctgctatctgttagacttctttgactcacaagtcctctattagct 380
Query: 181 tgctagagtcaccaaaataagataaaacagactgggtggtttgaataacaaaaatttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctagagtcaccaaaataagataaaacagactgggtggtttgaataacaaaaatttgtt 440
Query: 241 tcttataattctggatgcttaa 262
||||||||||||||||||||||
Sbjct: 441 tcttataattctggatgcttaa 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_h24.g1 MSMg01no280_h24.g1 CHROMAT_FILE:
MSMg01no280_h24.g1 PHD_FILE: MSMg01no280_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:21 2005
(286 letters)
>mm_chr15_62281859_62282546
Length = 688
Score = 472 bits (244), Expect = e-137
Identities = 277/288 (96%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 agcagagtttgactcaggtgatg-aaacctagttggtatgtgaactgacactaacgttaa 59
|||| |||||||||||||||||| |||||||||||||||||||||||| | |||| ||||
Sbjct: 488 agcacagtttgactcaggtgatgaaaacctagttggtatgtgaactgaaaataacattaa 429
Query: 60 cactgtacaaatgctttaatatgaggatcttgaagaataaatacggaatatggatgacag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cactgtacaaatgctttaatatgaggatcttgaagaataaatacggaatatggatgacag 369
Query: 120 agaaaactcatccttatctcgggaagatgaaaagctggacaaatactttttttttttttg 179
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 368 agaaaactcatccttatctcgggaagatggaaagctggacaaattctttttttttttttt 309
Query: 180 -ggcccagccccaaactggacaaattctaagaacatcttcactgtgcaagagaaaggctg 238
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tggaccagccccaaactggacaaattctaagaacatcttcactgtgcaagagaaaggctg 249
Query: 239 ttcaccgtgggatcatatgtctcagactgaaacccaattgtatcctaa 286
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 248 ttcaccgtgggatcagatgtctcagactgaaacccaattgtatcctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 688
Length adjustment: 9
Effective length of query: 277
Effective length of database: 679
Effective search space: 188083
Effective search space used: 188083
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
